RNA–Protein interactions for RNA: ENST00000481356.1

SRPRB-203, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 1,487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-203ENST00000481356 ZBTB43O43298 467 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 ARIH2O95376 493 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CALM1P0DP23 149 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CALM2P0DP24 149 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CALM3P0DP25 149 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 EDNRBP24530 442 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CDC27P30260 824 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 ACLYP53396 1101 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 GJA9P57773 515 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 RTN1Q16799 776 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
SRPRB-203ENST00000481356 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 IL31RAQ8NI17 732 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
SRPRB-203ENST00000481356 BRF1Q92994 677 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 PXMP2Q9NR77 195 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
SRPRB-203ENST00000481356 SORBS3O60504 671 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 ASGR1P07306 291 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
SRPRB-203ENST00000481356 GNAQP50148 359 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 SEPT14Q6ZU15 432 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 PPP1R13LQ8WUF5 828 aa12.8□□□□□ -0.36
SRPRB-203ENST00000481356 FAM217BQ9NTX9 383 aaPredicted RBP12.8□□□□□ -0.36
SRPRB-203ENST00000481356 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
SRPRB-203ENST00000481356 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
SRPRB-203ENST00000481356 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
SRPRB-203ENST00000481356 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 USP17L6PQ6QN14 398 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 OR6J1Q8NGC5 347 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 NSUN6Q8TEA1 469 aaKnown RBP12.79□□□□□ -0.36
SRPRB-203ENST00000481356 LZTS2Q9BRK4 669 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
SRPRB-203ENST00000481356 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
SRPRB-203ENST00000481356 PRDM5Q9NQX1 630 aaPredicted RBP12.79□□□□□ -0.36
SRPRB-203ENST00000481356 RBM47A0AV96 593 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 B4DLN1 442 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 SEC24BO95487 1268 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 NR3C2P08235 984 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 CST5P28325 142 aaPredicted RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 MDM2Q00987 491 aaPredicted RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 GHRHRQ02643 423 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 TRAF1Q13077 416 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 FSCN1Q16658 493 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 UBE2SQ16763 222 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 LY6KQ17RY6 165 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 DUSP28Q4G0W2 176 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 STARD7Q9NQZ5 370 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 LOC102724159A0A0B4J2E5 919 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 TXNP10599 105 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PSMA5P28066 241 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PSMC6P62333 389 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 CCT2P78371 535 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 TLE2Q04725 743 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 FUT2Q10981 343 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PGM5Q15124 567 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PWP2Q15269 919 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 WWC2Q6AWC2 1192 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
SRPRB-203ENST00000481356 TSEN34Q9BSV6 310 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
SRPRB-203ENST00000481356 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 DTNBO60941 627 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 MYL3P08590 195 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 SNX17Q15036 470 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 STXBP2Q15833 593 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 PCSK9Q8NBP7 692 aaKnown RBP12.77□□□□□ -0.37
SRPRB-203ENST00000481356 SMARCC2Q8TAQ2 1214 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 SCFD2Q8WU76 684 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.37
SRPRB-203ENST00000481356 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
SRPRB-203ENST00000481356 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
SRPRB-203ENST00000481356 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
SRPRB-203ENST00000481356 MEIS2O14770 477 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms