RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TACO1Q9BSH4 297 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 LSM14BQ9BX40 385 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 KCNK9Q9NPC2 374 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 GNAT1P11488 350 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 MFAP3P55082 362 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PNOCQ13519 176 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 BBS5Q8N3I7 341 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CCDC89Q8N998 374 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 STRBPQ96SI9 672 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 NLRC4Q9NPP4 1024 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 LRFN2Q9ULH4 789 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 HOXD10P28358 340 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PPP1R21Q6ZMI0 780 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 UBLCP1Q8WVY7 318 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 P3H4Q92791 437 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 ATP2A3Q93084 1043 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 RAB20Q9NX57 234 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 TLR7Q9NYK1 1049 aaKnown RBP10.37□□□□□ -0.75
GARNL3-216ENST00000481242 PCDHA7Q9UN72 937 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 USTQ9Y2C2 406 aa10.37□□□□□ -0.75
GARNL3-216ENST00000481242 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 INO80B-WBP1J3KQ70 363 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 PSMC2P35998 433 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 EVCP57679 992 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CYP4A11Q02928 519 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 PPP1R18Q6NYC8 613 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CCDC105Q8IYK2 499 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CNPY4Q8N129 248 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 TBCKQ8TEA7 893 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 SYMPKQ92797 1274 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CEP170P1Q96L14 293 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 AKT3Q9Y243 479 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 USP17L5A8MUK1 530 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CRCPO75575 148 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 STAM2O75886 525 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 RHOXF2BP0C7M4 288 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 EXOC3L4Q17RC7 722 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 KCTD1Q719H9 257 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CRAMP1Q96RY5 1269 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 PIGSQ96S52 555 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 RHOXF2Q9BQY4 288 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 HAUS4Q9H6D7 363 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 KMT5AQ9NQR1 393 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 C1orf167Q5SNV9 1468 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 EBAG9O00559 213 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 DAAM2Q86T65 1068 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 RPAINQ86UA6 219 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 PPM1KQ8N3J5 372 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 FEM1BQ9UK73 627 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 LMTK2Q8IWU2 1503 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 M0R2C6 588 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 MMP1P03956 469 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 GBP1P32455 592 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 NSFP46459 744 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 JAK3P52333 1124 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 SLC12A2P55011 1212 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 CUL4BQ13620 913 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 ALX1Q15699 326 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 SPATA24Q86W54 205 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 FAM76AQ8TAV0 307 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 TCP11Q8WWU5 503 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 PUS7LQ9H0K6 701 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 GEMIN8Q9NWZ8 242 aaKnown RBP10.36□□□□□ -0.75
GARNL3-216ENST00000481242 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
GARNL3-216ENST00000481242 ATP8B3O60423 1300 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 THAP12O43422 761 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 OATP04181 439 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 KCNQ4P56696 695 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 GABPAQ06546 454 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 RBBP5Q15291 538 aaKnown RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 HLFQ16534 295 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 SLFN12LQ6IEE8 588 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 PROCA1Q8NCQ7 364 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 U2AF1L4Q8WU68 220 aaKnown RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 GRIN3BO60391 1043 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 SLFN14P0C7P3 912 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 DLATP10515 647 aaKnown RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 TCP1P17987 556 aaKnown RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 GEN1Q17RS7 908 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 FYB2Q5VWT5 728 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 BBOF1Q8ND07 529 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 NEK9Q8TD19 979 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 MRFAP1L1Q96HT8 127 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 RSRC1Q96IZ7 334 aaKnown RBP10.35□□□□□ -0.75
GARNL3-216ENST00000481242 ABCA9Q8IUA7 1624 aa10.35□□□□□ -0.75
GARNL3-216ENST00000481242 SH3BGRP55822 239 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms