RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 JMJD7P0C870 316 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 CD8BP10966 210 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 SOX5P35711 763 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 CDKN1CP49918 316 aaPredicted RBP7.32□□□□□ -1.24
UPF3A-207ENST00000481131 PKN3Q6P5Z2 889 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 LINC01599Q8WXQ3 324 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 MAP6Q96JE9 813 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 HHIPL1Q96JK4 782 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 PPARGC1AQ9UBK2 798 aaKnown RBP7.32□□□□□ -1.24
UPF3A-207ENST00000481131 PCDHA2Q9Y5H9 948 aa7.32□□□□□ -1.24
UPF3A-207ENST00000481131 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
UPF3A-207ENST00000481131 FADS2P1A8MWK0 482 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 KPNA6O60684 536 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 TBC1D8O95759 1140 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 PRNPP04156 253 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 CKMP06732 381 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 RALGPS1Q5JS13 557 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
UPF3A-207ENST00000481131 NLRP10Q86W26 655 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 PPM1KQ8N3J5 372 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 PCDH19Q8TAB3 1148 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
UPF3A-207ENST00000481131 STAG1Q8WVM7 1258 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 ADAMTS10Q9H324 1103 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 LMCD1Q9NZU5 365 aa7.31□□□□□ -1.24
UPF3A-207ENST00000481131 PPP1R11O60927 126 aaPredicted RBP7.3□□□□□ -1.24
UPF3A-207ENST00000481131 ZGLP1P0C6A0 271 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 GRIK1P39086 918 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 NEK4P51957 841 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
UPF3A-207ENST00000481131 MCTP1Q6DN14 999 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 INTS5Q6P9B9 1019 aaKnown RBP7.3□□□□□ -1.24
UPF3A-207ENST00000481131 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
UPF3A-207ENST00000481131 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 PRPF38AQ8NAV1 312 aaKnown RBP7.3□□□□□ -1.24
UPF3A-207ENST00000481131 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 ATP8A1Q9Y2Q0 1164 aa7.3□□□□□ -1.24
UPF3A-207ENST00000481131 RAB11FIP3O75154 756 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 GLRX3O76003 335 aaKnown RBP7.29□□□□□ -1.24
UPF3A-207ENST00000481131 BCL6P41182 706 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 GP2P55259 537 aaKnown RBP7.29□□□□□ -1.24
UPF3A-207ENST00000481131 EVA1CP58658 441 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 NFKB2Q00653 900 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 ZP2Q05996 745 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 PAK1Q13153 545 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 KIZQ2M2Z5 673 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 CFAP100Q494V2 611 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 PIK3R6Q5UE93 754 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 SLCO6A1Q86UG4 719 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 IPPKQ9H8X2 491 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 PRDM7Q9NQW5 492 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 SAMD15Q9P1V8 674 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 TNFRSF10DQ9UBN6 386 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 CCDC39Q9UFE4 941 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 SLC5A6Q9Y289 635 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 COQ6Q9Y2Z9 468 aa7.29□□□□□ -1.24
UPF3A-207ENST00000481131 TIMM13Q9Y5L4 95 aaPredicted RBP7.29□□□□□ -1.24
UPF3A-207ENST00000481131 WNT9AO14904 365 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 USP2O75604 605 aaPredicted RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 EYA4O95677 639 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 SOD2P04179 222 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 NAT1P18440 290 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 SKOR2Q2VWA4 1001 aaPredicted RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 CT47A1Q5JQC4 288 aaPredicted RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 ANGEL2Q5VTE6 544 aaKnown RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 HLA-DQA1Q5Y7H0 255 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 ZC3H7AQ8IWR0 971 aaKnown RBP7.28□□□□□ -1.24
UPF3A-207ENST00000481131 AHI1Q8N157 1196 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 IGSF22Q8N9C0 903 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 ALG1Q9BT22 464 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 GULP1Q9UBP9 304 aa7.28□□□□□ -1.24
UPF3A-207ENST00000481131 NOTOA8MTQ0 251 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 B4E1Z4 1266 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 NPHS1O60500 1241 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 NPTXRO95502 500 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 EFEMP2O95967 443 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 GRK2P25098 689 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 GRK3P35626 688 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
UPF3A-207ENST00000481131 LSAMPQ13449 338 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 DDX46Q7L014 1031 aaKnown RBP7.27□□□□□ -1.25
UPF3A-207ENST00000481131 Q8N1Y9 231 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 ORAI3Q9BRQ5 295 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 DDX56Q9NY93 547 aaKnown RBP7.27□□□□□ -1.25
UPF3A-207ENST00000481131 FBLN5Q9UBX5 448 aa7.27□□□□□ -1.25
UPF3A-207ENST00000481131 CBX4O00257 560 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 MYO1BO43795 1136 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 FPR2P25090 351 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 FLT3P36888 993 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
UPF3A-207ENST00000481131 STRN3Q13033 797 aa7.26□□□□□ -1.25
UPF3A-207ENST00000481131 DHCR24Q15392 516 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms