RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 SYT3Q9BQG1 590 aa3.64□□□□□ -1.83
R3HDM1-214ENST00000480793 PCDHB14Q9Y5E9 798 aa3.64□□□□□ -1.83
R3HDM1-214ENST00000480793 B4GALT4O60513 344 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 PRPF40AO75400 957 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 GBP2P32456 591 aaPredicted RBP3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 RBM10P98175 930 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 FAM160A1Q05DH4 1040 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 USP39Q53GS9 565 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 NOL9Q5SY16 702 aaKnown RBP3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 ERICH6Q7L0X2 663 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 RELL1Q8IUW5 271 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 CCDC144CPQ8IYA2 1237 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 GOLM1Q8NBJ4 401 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 FBXO27Q8NI29 283 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 ATG4CQ96DT6 458 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 ADOQ96SZ5 270 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 MEGF9Q9H1U4 602 aa3.63□□□□□ -1.83
R3HDM1-214ENST00000480793 TLR3O15455 904 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 ATE1O95260 518 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 BRD1O95696 1058 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 CD3EP07766 207 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 IL12RB1P42701 662 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 PWP1Q13610 501 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 DCP2Q8IU60 420 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 FAM26EQ8N5C1 309 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 YTHDC1Q96MU7 727 aaKnown RBP3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 TMEM74Q96NL1 305 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 FCRL3Q96P31 734 aaPredicted RBP3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 FBLN5Q9UBX5 448 aa3.62□□□□□ -1.83
R3HDM1-214ENST00000480793 ADH4P08319 380 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 IFNGR1P15260 489 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 POU4F1Q01851 419 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 FAM196AQ6ZSG2 479 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 MIB1Q86YT6 1006 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 KLHL36Q8N4N3 616 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 AP5M1Q9H0R1 490 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 BRMS1Q9HCU9 246 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 NGRNQ9NPE2 291 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 SF3B6Q9Y3B4 125 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 SIT1Q9Y3P8 196 aa3.61□□□□□ -1.83
R3HDM1-214ENST00000480793 KRTAP29-1A8MX34 341 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 SHOXO15266 292 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 CYP7B1O75881 506 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 NME1P15531 152 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 IL13P35225 146 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 KRTAP10-9P60411 292 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 EEF1DP3Q658K8 133 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 MRGPRGQ86SM5 289 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 LDLRAD3Q86YD5 345 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 FIBCD1Q8N539 461 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 BRF1Q92994 677 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 DHRS1Q96LJ7 313 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 MTA3Q9BTC8 594 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 BARX1Q9HBU1 254 aaPredicted RBP3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 GULP1Q9UBP9 304 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 SUCOQ9UBS9 1254 aaKnown RBP3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 FTSJ1Q9UET6 329 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 IVNS1ABPQ9Y6Y0 642 aa3.6□□□□□ -1.83
R3HDM1-214ENST00000480793 TNFRSF10CO14798 259 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 NTRK1P04629 796 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 ZNF445P59923 1031 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 DGCR2P98153 550 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 PDE4CQ08493 712 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 NFATC3Q12968 1075 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 ADAM9Q13443 819 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 RCSD1Q6JBY9 416 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 GIMAP8Q8ND71 665 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 SMARCC1Q92922 1105 aaPredicted RBP3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 EXTL1Q92935 676 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 CLIC6Q96NY7 704 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 AGAP2Q99490 1192 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 DUSP9Q99956 384 aaKnown RBP3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 RSRP1Q9BUV0 290 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 LRRC3Q9BY71 257 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 SEC61A2Q9H9S3 476 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 ZDHHC9Q9Y397 364 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 FHOD1Q9Y613 1164 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 ROBO2Q9HCK4 1378 aa3.59□□□□□ -1.83
R3HDM1-214ENST00000480793 MINDY4BA8MYZ0 360 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 C9IYK1 514 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 FOXS1O43638 330 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 RGS19P49795 217 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 ZC3H6P61129 1189 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 NKX3-2P78367 333 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 CCDC142Q17RM4 750 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 LRRFIP1Q32MZ4 808 aaKnown RBP3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 FAM126BQ8IXS8 530 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 EDAQ92838 391 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 ZSWIM3Q96MP5 696 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 ZDHHC15Q96MV8 337 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 GNRHR2Q96P88 292 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 WRNIP1Q96S55 665 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 YIPF4Q9BSR8 244 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 TRAIPQ9BWF2 469 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 EHMT1Q9H9B1 1298 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 GP6Q9HCN6 339 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 DMRT1Q9Y5R6 373 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 USP31Q70CQ4 1352 aa3.58□□□□□ -1.84
R3HDM1-214ENST00000480793 NPHS1O60500 1241 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms