RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 SMPD4Q9NXE4 827 aa5.72□□□□□ -1.49
CLOCK-204ENST00000479384 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLOCK-204ENST00000479384 DDX41Q9UJV9 622 aaKnown RBP5.72□□□□□ -1.49
CLOCK-204ENST00000479384 SIT1Q9Y3P8 196 aa5.72□□□□□ -1.49
CLOCK-204ENST00000479384 NPHP3-ACAD11A0A0J9YXS1 232 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 A0A1W2PQH9 124 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 C7orf72A4D263 438 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 C8BP07358 591 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 C19orf47Q8N9M1 422 aaKnown RBP5.71□□□□□ -1.5
CLOCK-204ENST00000479384 USP33Q8TEY7 942 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 RCC1LQ96I51 464 aaKnown RBP5.71□□□□□ -1.5
CLOCK-204ENST00000479384 CRBNQ96SW2 442 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 GORASP1Q9BQQ3 440 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
CLOCK-204ENST00000479384 CCDC9Q9Y3X0 531 aaKnown RBP5.71□□□□□ -1.5
CLOCK-204ENST00000479384 TRBV23OR9-2A0A075B6M9 112 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 SMARCA5O60264 1052 aaPredicted RBP5.7□□□□□ -1.5
CLOCK-204ENST00000479384 FUCA1P04066 466 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 NTRK1P04629 796 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 CYP2C8P10632 490 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 SOX9P48436 509 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 GIPRP48546 466 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 EIF6P56537 245 aaKnown RBP5.7□□□□□ -1.5
CLOCK-204ENST00000479384 PAK2Q13177 524 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 SYT3Q9BQG1 590 aa5.7□□□□□ -1.5
CLOCK-204ENST00000479384 NPHS1O60500 1241 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 TNFRSF1AP19438 455 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 THBS2P35442 1172 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 MBLAC2Q68D91 279 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 ZNF513Q8N8E2 541 aaPredicted RBP5.69□□□□□ -1.5
CLOCK-204ENST00000479384 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 C11orf84Q9BUA3 381 aaPredicted RBP5.69□□□□□ -1.5
CLOCK-204ENST00000479384 EFR3BQ9Y2G0 817 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 SUGT1Q9Y2Z0 365 aa5.69□□□□□ -1.5
CLOCK-204ENST00000479384 MATN3O15232 486 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 PLATP00750 562 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 RPL13P26373 211 aaKnown RBP5.68□□□□□ -1.5
CLOCK-204ENST00000479384 RGL3Q3MIN7 710 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 TBC1D10BQ4KMP7 808 aaPredicted RBP5.68□□□□□ -1.5
CLOCK-204ENST00000479384 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
CLOCK-204ENST00000479384 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 COPS5Q92905 334 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 CLEC1BQ9P126 229 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 APEX2Q9UBZ4 518 aa5.68□□□□□ -1.5
CLOCK-204ENST00000479384 PLS3P13797 630 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 CPZQ66K79 652 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 ZNF654Q8IZM8 581 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 FAM26EQ8N5C1 309 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 TTC9BQ8N6N2 239 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 KYQ8NBH2 561 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 DPF3Q92784 378 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 LOXL4Q96JB6 756 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 SPATA32Q96LK8 384 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 C8orf49Q96NF6 230 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 SAMD11Q96NU1 681 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 MMP19Q99542 508 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 MARCH2Q9P0N8 246 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 AKT3Q9Y243 479 aa5.67□□□□□ -1.5
CLOCK-204ENST00000479384 SGSM2O43147 1006 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 AKAP8O43823 692 aaKnown RBP5.66□□□□□ -1.5
CLOCK-204ENST00000479384 ZNF20P17024 532 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
CLOCK-204ENST00000479384 ZXDAP98168 799 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 SCRN1Q12765 414 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 KIAA1211LQ6NV74 962 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 RASGRP4Q8TDF6 673 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 C1QTNF3Q9BXJ4 246 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 EMC9Q9Y3B6 208 aa5.66□□□□□ -1.5
CLOCK-204ENST00000479384 ANKRD34BA5PLL1 514 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 MROH6A6NGR9 719 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 C1QTNF3-AMACRE9PGA6 284 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 KCNH1O95259 989 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 RECKO95980 971 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 RBM10P98175 930 aaKnown RBP5.65□□□□□ -1.5
CLOCK-204ENST00000479384 INF2Q27J81 1249 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 FAM26FQ5R3K3 315 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 PRR31Q5SQ13 230 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 C9orf131Q5VYM1 1079 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 STK32CQ86UX6 486 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 TEX2Q8IWB9 1127 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 LGI4Q8N135 537 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 GPRASP2Q96D09 838 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 SHDQ96IW2 340 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 SSBP3Q9BWW4 388 aaPredicted RBP5.65□□□□□ -1.5
CLOCK-204ENST00000479384 AP5M1Q9H0R1 490 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 INVSQ9Y283 1065 aa5.65□□□□□ -1.5
CLOCK-204ENST00000479384 THBDP07204 575 aa5.64□□□□□ -1.51
CLOCK-204ENST00000479384 CASP7P55210 303 aa5.64□□□□□ -1.51
CLOCK-204ENST00000479384 ITGA1P56199 1179 aa5.64□□□□□ -1.51
CLOCK-204ENST00000479384 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
CLOCK-204ENST00000479384 MCTP2Q6DN12 878 aa5.64□□□□□ -1.51
CLOCK-204ENST00000479384 VHLLQ6RSH7 139 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms