RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
SREBF1-212ENST00000478616 ELP1O95163 1332 aa21.79■■□□□ 1.08
SREBF1-212ENST00000478616 RGS20O76081 388 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 CFBP00751 764 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 CXCL17Q6UXB2 119 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 MCF2L2Q86YR7 1114 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 PIBF1Q8WXW3 757 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 RMDN3Q96TC7 470 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 PXMP2Q9NR77 195 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 FAM217BQ9NTX9 383 aaPredicted RBP21.78■■□□□ 1.08
SREBF1-212ENST00000478616 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
SREBF1-212ENST00000478616 A0A1W2PPC1 479 aa21.77■■□□□ 1.08
SREBF1-212ENST00000478616 NEFLP07196 543 aa21.77■■□□□ 1.08
SREBF1-212ENST00000478616 SMARCA1P28370 1054 aa21.77■■□□□ 1.08
SREBF1-212ENST00000478616 PDE4DQ08499 809 aa21.77■■□□□ 1.08
SREBF1-212ENST00000478616 FUT2Q10981 343 aa21.77■■□□□ 1.08
SREBF1-212ENST00000478616 DHX32Q7L7V1 743 aaKnown RBP21.77■■□□□ 1.08
SREBF1-212ENST00000478616 PCSK9Q8NBP7 692 aaKnown RBP21.77■■□□□ 1.08
SREBF1-212ENST00000478616 KIAA0355O15063 1070 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 PQBP1O60828 265 aaKnown RBP21.76■■□□□ 1.07
SREBF1-212ENST00000478616 EIF2AK2P19525 551 aaKnown RBP21.76■■□□□ 1.07
SREBF1-212ENST00000478616 RNF20Q5VTR2 975 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 APOA5Q6Q788 366 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 TMTC3Q6ZXV5 915 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 NOL8Q76FK4 1167 aaKnown RBP21.76■■□□□ 1.07
SREBF1-212ENST00000478616 NSUN6Q8TEA1 469 aaKnown RBP21.76■■□□□ 1.07
SREBF1-212ENST00000478616 TOX2Q96NM4 488 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 PDCD2LQ9BRP1 358 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 TBX21Q9UL17 535 aa21.76■■□□□ 1.07
SREBF1-212ENST00000478616 hCG_1642624A0A1W2PR95 340 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 CCDC69A6NI79 296 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 CLTBP09497 229 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 EPHB4P54760 987 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 FAM126BQ8IXS8 530 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 TMTC2Q8N394 836 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 FANCBQ8NB91 859 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 CTCFLQ8NI51 663 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-212ENST00000478616 BADQ92934 168 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 GLT1D1Q96MS3 346 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 FRMPD4Q14CM0 1322 aa21.75■■□□□ 1.07
SREBF1-212ENST00000478616 ARVCFO00192 962 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 CD4P01730 458 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 NR3C2P08235 984 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 PSMC6P62333 389 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 ERICH6BQ5W0A0 696 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 SCFD2Q8WU76 684 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 LRCH3Q96II8 777 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 ZFP91Q96JP5 570 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-212ENST00000478616 IWS1Q96ST2 819 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 AP5M1Q9H0R1 490 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 SPC25Q9HBM1 224 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 PRDM5Q9NQX1 630 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-212ENST00000478616 CNTNAP5Q8WYK1 1306 aa21.74■■□□□ 1.07
SREBF1-212ENST00000478616 LAMA2P24043 3122 aaKnown RBP21.73■■□□□ 1.07
SREBF1-212ENST00000478616 MEIS2O14770 477 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 PURAQ00577 322 aaKnown RBP21.73■■□□□ 1.07
SREBF1-212ENST00000478616 ARHGAP1Q07960 439 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 PGM5Q15124 567 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 LY6KQ17RY6 165 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 TYW1BQ6NUM6 668 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 SEPT14Q6ZU15 432 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 VSIG10LQ86VR7 867 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 PPP1R13LQ8WUF5 828 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 GPKOWQ92917 476 aaPredicted RBP eCLIP21.73■■□□□ 1.07
SREBF1-212ENST00000478616 UBE2OQ9C0C9 1292 aaKnown RBP21.73■■□□□ 1.07
SREBF1-212ENST00000478616 DDX41Q9UJV9 622 aaKnown RBP21.73■■□□□ 1.07
SREBF1-212ENST00000478616 SLC12A7Q9Y666 1083 aa21.73■■□□□ 1.07
SREBF1-212ENST00000478616 A0A0U1RQG5 324 aaPredicted RBP21.72■■□□□ 1.07
SREBF1-212ENST00000478616 A6NJR5 290 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 TXNP10599 105 aaKnown RBP21.72■■□□□ 1.07
SREBF1-212ENST00000478616 CDC27P30260 824 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 KIF5BP33176 963 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 PPP2R5BQ15173 497 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 ARHGEF16Q5VV41 709 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 TDHQ8IZJ6 230 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 OR6J1Q8NGC5 347 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 LZTS2Q9BRK4 669 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 AGXT2Q9BYV1 514 aa21.72■■□□□ 1.07
SREBF1-212ENST00000478616 MAP3K20Q9NYL2 800 aaKnown RBP21.72■■□□□ 1.07
SREBF1-212ENST00000478616 GCOM1H8Y6P7 765 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-212ENST00000478616 POLR2MP0CAP2 368 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 MRPS9P82933 396 aaKnown RBP21.71■■□□□ 1.07
SREBF1-212ENST00000478616 SP2Q02086 613 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 STXBP2Q15833 593 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 C9orf50Q5SZB4 431 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 CCDC82Q8N4S0 544 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 SAMD3Q8N6K7 520 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 USP26Q9BXU7 913 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 BCAS3Q9H6U6 928 aa21.71■■□□□ 1.07
SREBF1-212ENST00000478616 NKRFO15226 690 aaKnown RBP eCLIP21.7■■□□□ 1.062e-7■□□□□ 9.5
SREBF1-212ENST00000478616 EIF3JO75822 258 aaKnown RBP21.7■■□□□ 1.06
SREBF1-212ENST00000478616 CALM1P0DP23 149 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 CALM2P0DP24 149 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 CALM3P0DP25 149 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 SEMA3FQ13275 785 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 ITGA7Q13683 1181 aa21.7■■□□□ 1.06
SREBF1-212ENST00000478616 KRT32Q14532 448 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms