RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
USP11-207ENST00000478596 ARMT1Q9H993 441 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
USP11-207ENST00000478596 HELLSQ9NRZ9 838 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 MCM3APO60318 1980 aa17.07■□□□□ 0.32
USP11-207ENST00000478596 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 SOWAHBA6NEL2 793 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 GPAA1O43292 621 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 APPP05067 770 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 CDK8P49336 464 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
USP11-207ENST00000478596 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 NFRKBQ6P4R8 1299 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 KIAA1211Q6ZU35 1233 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 RNF135Q8IUD6 432 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 SUGP1Q8IWZ8 645 aaKnown RBP17.06■□□□□ 0.32
USP11-207ENST00000478596 LCORLQ8N3X6 602 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 FBXO22Q8NEZ5 403 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 PDGFCQ9NRA1 345 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 MYH8P13535 1937 aa17.06■□□□□ 0.32
USP11-207ENST00000478596 TANC1Q9C0D5 1861 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 TMEM221A6NGB7 291 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 USP17L21D6R901 530 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 M0R296 226 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 PTPN11Q06124 597 aaPredicted RBP17.05■□□□□ 0.32
USP11-207ENST00000478596 TMEM63BQ5T3F8 832 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 TRIM67Q6ZTA4 783 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 OSBP2Q969R2 916 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 SEC62Q99442 399 aaKnown RBP17.05■□□□□ 0.32
USP11-207ENST00000478596 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
USP11-207ENST00000478596 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
USP11-207ENST00000478596 FAM86C1Q9NVL1 165 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
USP11-207ENST00000478596 SLC4A4Q9Y6R1 1079 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 LAMA4Q16363 1823 aa17.05■□□□□ 0.32
USP11-207ENST00000478596 PTPRSQ13332 1948 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 PROB1E7EW31 1015 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 GNAT2P19087 354 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 GPNMBQ14956 572 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 DUSP28Q4G0W2 176 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 C16orf86Q6ZW13 317 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 C17orf80Q9BSJ5 609 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 ACAD9Q9H845 621 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
USP11-207ENST00000478596 PTPRZ1P23471 2315 aaPredicted RBP17.04■□□□□ 0.32
USP11-207ENST00000478596 ABHD14A-ACY1A0A1B0GW23 586 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 F5H6K3 240 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 EFCAB14O75071 495 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 NDUFB10O96000 172 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 TDO2P48775 406 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 CPT1AP50416 773 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 KLRC3Q07444 240 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 TCEAL5Q5H9L2 206 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 FBXO16Q8IX29 292 aaPredicted RBP17.03■□□□□ 0.32
USP11-207ENST00000478596 FBXL6Q8N531 539 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.03■□□□□ 0.32
USP11-207ENST00000478596 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 VTA1Q9NP79 307 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 A1CFQ9NQ94 594 aaKnown RBP17.03■□□□□ 0.32
USP11-207ENST00000478596 SIP14410 1827 aa17.03■□□□□ 0.32
USP11-207ENST00000478596 NCK2O43639 380 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
USP11-207ENST00000478596 PARNO95453 639 aaKnown RBP17.02■□□□□ 0.32
USP11-207ENST00000478596 CXCL10P02778 98 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 LTBRP36941 435 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
USP11-207ENST00000478596 CCDC155Q8N6L0 562 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 ATOH1Q92858 354 aaPredicted RBP17.02■□□□□ 0.32
USP11-207ENST00000478596 KIFC2Q96AC6 838 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.32
USP11-207ENST00000478596 HOMER2Q9NSB8 354 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 ATP8A2Q9NTI2 1148 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
USP11-207ENST00000478596 TET1Q8NFU7 2136 aa17.02■□□□□ 0.31
USP11-207ENST00000478596 DMDP11532 3685 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 SGSM2O43147 1006 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 REC8O95072 547 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 MYL3P08590 195 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 EEPD1Q7L9B9 569 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 SAMD11Q96NU1 681 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 NAPBQ9H115 298 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 NSUN3Q9H649 340 aaKnown RBP17.01■□□□□ 0.31
USP11-207ENST00000478596 CLDND1Q9NY35 253 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
USP11-207ENST00000478596 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
USP11-207ENST00000478596 FDX1P10109 184 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms