RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	JMJD4	Q9H9V9	463 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	HMX1	Q9NP08	348 aa	Predicted RBP	4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	STX8	Q9UNK0	236 aa		4.98	□□□□□ -1.61
POLR2B-208	ENST00000478188	GBF1	Q92538	1859 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RBM47	A0AV96	593 aa	Known RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	NFIB	O00712	420 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	FARP2	O94887	1054 aa	Predicted RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	CNTN2	Q02246	1040 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	FUT2	Q10981	343 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RRP12	Q5JTH9	1297 aa	Known RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RUFY2	Q8WXA3	655 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	PURB	Q96QR8	312 aa	Known RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	MAP3K14	Q99558	947 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	TINF2	Q9BSI4	451 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	MAF1	Q9H063	256 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RIOX1	Q9H6W3	641 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RNF146	Q9NTX7	359 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	COL20A1	Q9P218	1284 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	DDX49	Q9Y6V7	483 aa	Known RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	MYH7B	A7E2Y1	1941 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	MYADML2	A6NDP7	307 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	SEPT4	O43236	478 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	ZBED4	O75132	1171 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	CDC45	O75419	566 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	PRKCSH	P14314	528 aa	Predicted RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	CST5	P28325	142 aa	Predicted RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	ADCK5	Q3MIX3	580 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	ASPRV1	Q53RT3	343 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	PRAMEF19	Q5SWL8	479 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	TMEM63B	Q5T3F8	832 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	TAPT1	Q6NXT6	567 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	ADGRF4	Q8IZF3	695 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	FBXL16	Q8N461	479 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RGS22	Q8NE09	1264 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	CHURC1	Q8WUH1	139 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	LENG1	Q96BZ8	264 aa	Predicted RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	AGXT2	Q9BYV1	514 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	ACAD9	Q9H845	621 aa		4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	RANBP2	P49792	3224 aa	Known RBP	4.97	□□□□□ -1.61
POLR2B-208	ENST00000478188	SYNRG	Q9UMZ2	1314 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	MYC	P01106	439 aa	Predicted RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	GOLGA8H	P0CJ92	632 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	PTGS1	P23219	599 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	CCDC178	Q5BJE1	867 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	GPATCH4	Q5T3I0	446 aa	Known RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	C1orf53	Q5VUE5	145 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	METTL3	Q86U44	580 aa	Known RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	SGMS1	Q86VZ5	419 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	TRERF1	Q96PN7	1200 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	SLC24A3	Q9HC58	644 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	GPCPD1	Q9NPB8	672 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	PHF24	Q9UPV7	400 aa		4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	GNE	Q9Y223	722 aa	Known RBP	4.96	□□□□□ -1.61
POLR2B-208	ENST00000478188	LOC102724159	A0A0B4J2E5	919 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	DNM1L	O00429	736 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	HSPA4	P34932	840 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	HSD17B4	P51659	736 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	FOXK2	Q01167	660 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	PLS1	Q14651	629 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	PWP2	Q15269	919 aa	Known RBP	4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	CDC37	Q16543	378 aa	Predicted RBP	4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	LRRC26	Q2I0M4	334 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	QRICH1	Q2TAL8	776 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	MFSD14C	Q5VZR4	134 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	CCDC174	Q6PII3	467 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	ARMCX2	Q7L311	632 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	ZNF516	Q92618	1163 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	SYMPK	Q92797	1274 aa	Known RBP	4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	PAWR	Q96IZ0	340 aa	Known RBP	4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	FBXO40	Q9UH90	709 aa		4.96	□□□□□ -1.62
POLR2B-208	ENST00000478188	DNAJB2	P25686	324 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	LIFR	P42702	1097 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	ALDH5A1	P51649	535 aa	Predicted RBP	4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	COPS2	P61201	443 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	LRRC41	Q15345	812 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CHST3	Q7LGC8	479 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CCDC144CP	Q8IYA2	1237 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CPXCR1	Q8N123	301 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	NCOA7	Q8NI08	942 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	TBC1D5	Q92609	795 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	UBA5	Q9GZZ9	404 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	PPP4R2	Q9NY27	417 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	SZT2	Q5T011	3432 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CNTNAP5	Q8WYK1	1306 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	EPB41L2	O43491	1005 aa	Known RBP	4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	DDAH1	O94760	285 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	EVC	P57679	992 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	GJA9	P57773	515 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	KCTD2	Q14681	263 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CCDC96	Q2M329	555 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	DPP9	Q86TI2	863 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	IQCA1	Q86XH1	822 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	SLC43A3	Q8NBI5	491 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	CHMP4C	Q96CF2	233 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	TMUB1	Q9BVT8	246 aa		4.95	□□□□□ -1.62
POLR2B-208	ENST00000478188	SPZ1	Q9BXG8	430 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms