RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GPC2Q8N158 579 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 FAM20AQ96MK3 541 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 CTAGE1Q96RT6 745 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 ZNF341Q9BYN7 854 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 TMEM39BQ9GZU3 492 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 TMEM60Q9H2L4 133 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 AS3MTQ9HBK9 375 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 DDX25Q9UHL0 483 aaKnown RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 CNOT7Q9UIV1 285 aaKnown RBP8.94□□□□□ -0.98
VMA21-203ENST00000477649 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 ABCB11O95342 1321 aa8.94□□□□□ -0.98
VMA21-203ENST00000477649 MYH4Q9Y623 1939 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 A0A087X0B3 334 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 PVALEFA0A1B0GWK0 134 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 A0A1W2PRG0 241 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 PHF20L1A8MW92 1017 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 AP5Z1O43299 807 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 CYP3A4P08684 503 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 SREBF1P36956 1147 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 Q4G0T1 1027 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 COBLL1Q53SF7 1204 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 HYIQ5T013 277 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 HAUS3Q68CZ6 603 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 FOXR2Q6PJQ5 311 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 RASGRP2Q7LDG7 609 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 CCDC150Q8NCX0 1101 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 ANKRD20A12PQ8NF67 263 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 ERMNQ8TAM6 284 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 NOC3LQ8WTT2 800 aaKnown RBP8.93□□□□□ -0.98
VMA21-203ENST00000477649 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 C7orf25Q9BPX7 421 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 WDR18Q9BV38 432 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 ANO3Q9BYT9 981 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 LRWD1Q9UFC0 647 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 PITPNM2Q9BZ72 1349 aa8.93□□□□□ -0.98
VMA21-203ENST00000477649 ARFGEF1Q9Y6D6 1849 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 GCOM1H8Y6P7 765 aaPredicted RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 MEIS2O14770 477 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 ADAMTS3O15072 1205 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 RHOBTB3O94955 611 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 SERPINC1P01008 464 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 RPN1P04843 607 aaKnown RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 POLR2MP0CAP2 368 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 AFMP43652 599 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 ARHGAP4P98171 946 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 FANCCQ00597 558 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 GHRHRQ02643 423 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 PSMD2Q13200 908 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 RRP1BQ14684 758 aaKnown RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 SV2BQ7L1I2 683 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 MCF2L2Q86YR7 1114 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 PRPF38AQ8NAV1 312 aaKnown RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 CRYGNQ8WXF5 182 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 ERCC4Q92889 916 aaPredicted RBP8.92□□□□□ -0.98
VMA21-203ENST00000477649 TEPSINQ96N21 525 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 FEZ1Q99689 392 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 KCNMB3Q9NPA1 279 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 TMEM260Q9NX78 707 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 GPRC5DQ9NZD1 345 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 RWDD2AQ9UIY3 292 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 ZNF112Q9UJU3 913 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 PCDHA12Q9UN75 941 aa8.92□□□□□ -0.98
VMA21-203ENST00000477649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.92□□□□□ -0.98
VMA21-203ENST00000477649 BICDL2A1A5D9 508 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 C19orf81C9J6K1 198 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 PSMA7O14818 248 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 FOXN1O15353 648 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 KIF20AO95235 890 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 ICAM1P05362 532 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 ZNF18P17022 549 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 CDK11BP21127 795 aaKnown RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 BMP6P22004 513 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 MUTP22033 750 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 TECP42680 631 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 TXKP42681 527 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 KCNJ6P48051 423 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 UBASH3AP57075 661 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 JAG1P78504 1218 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 CUL4BQ13620 913 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 KARSQ15046 597 aaKnown RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 UBE2SQ16763 222 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 FILIP1LQ4L180 1135 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 NAALADL2Q58DX5 795 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 FAM83BQ5T0W9 1011 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 CCDC186Q7Z3E2 898 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 KRT26Q7Z3Y9 468 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 SCYL3Q8IZE3 742 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 CCDC112Q8NEF3 446 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 DHTKD1Q96HY7 919 aaPredicted RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 TTC12Q9H892 705 aaPredicted RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 RRAGDQ9NQL2 400 aaPredicted RBP8.91□□□□□ -0.98
VMA21-203ENST00000477649 PICK1Q9NRD5 415 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 HACL1Q9UJ83 578 aa8.91□□□□□ -0.98
VMA21-203ENST00000477649 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms