RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 PQBP1O60828 265 aaKnown RBP14.19□□□□□ -0.14
PTPN7-210ENST00000477625 GNAQP50148 359 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 CDK7P50613 346 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 KRT32Q14532 448 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 DHX32Q7L7V1 743 aaKnown RBP14.19□□□□□ -0.14
PTPN7-210ENST00000477625 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 SPZ1Q9BXG8 430 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 PDLIM7Q9NR12 457 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
PTPN7-210ENST00000477625 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-210ENST00000477625 TRIM43BA6NCK2 446 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 DCDC2CA8MYV0 355 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 NKRFO15226 690 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTPN7-210ENST00000477625 CABYRO75952 493 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 CLTBP09497 229 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 EXOSC10Q01780 885 aaKnown RBP14.18□□□□□ -0.14
PTPN7-210ENST00000477625 STXBP2Q15833 593 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 ADCK5Q3MIX3 580 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 CXCL17Q6UXB2 119 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 SH3RF1Q7Z6J0 888 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 SGMS1Q86VZ5 419 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 PIBF1Q8WXW3 757 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 TRIM43Q96BQ3 446 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-210ENST00000477625 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
PTPN7-210ENST00000477625 PXMP2Q9NR77 195 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
PTPN7-210ENST00000477625 MROH7Q68CQ1 1323 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 MYH6P13533 1939 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 GCOM1H8Y6P7 765 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 ARVCFO00192 962 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 EIF3JO75822 258 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 HMGB1P09429 215 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 POLR2MP0CAP2 368 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 TXNP10599 105 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 EIF2AK2P19525 551 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 RXRAP19793 462 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 HOXA13P31271 388 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 FAAP100Q0VG06 881 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 PPP2R5BQ15173 497 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 SYNE3Q6ZMZ3 975 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 TDHQ8IZJ6 230 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 SRBD1Q8N5C6 995 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 FANCBQ8NB91 859 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 KCNB2Q92953 911 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 TMEM39AQ9NV64 488 aa14.17□□□□□ -0.14
PTPN7-210ENST00000477625 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
PTPN7-210ENST00000477625 KIAA0355O15063 1070 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 REC8O95072 547 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 NR3C2P08235 984 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 HSPA4P34932 840 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 CPT1AP50416 773 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 CCDC62Q6P9F0 684 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 SEPT14Q6ZU15 432 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 CMTR1Q8N1G2 835 aaKnown RBP14.16□□□□□ -0.14
PTPN7-210ENST00000477625 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 BADQ92934 168 aa14.16□□□□□ -0.14
PTPN7-210ENST00000477625 SEC63Q9UGP8 760 aaKnown RBP14.16□□□□□ -0.14
PTPN7-210ENST00000477625 A6NJR5 290 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 ARIH2O95376 493 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 ITGB8P26012 769 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-210ENST00000477625 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 MICU3Q86XE3 530 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 RAB11FIP4Q86YS3 637 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 COPS5Q92905 334 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 TCEANC2Q96MN5 208 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 PDCD2LQ9BRP1 358 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 SEZ6LQ9BYH1 1024 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 LAMA3Q16787 3333 aa14.15□□□□□ -0.14
PTPN7-210ENST00000477625 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
PTPN7-210ENST00000477625 KPNA6O60684 536 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-210ENST00000477625 RAG1P15918 1043 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 PURAQ00577 322 aaKnown RBP14.14□□□□□ -0.15
PTPN7-210ENST00000477625 LY6KQ17RY6 165 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 LRIT3Q3SXY7 679 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 APOA5Q6Q788 366 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 TMTC3Q6ZXV5 915 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 FCHSD1Q86WN1 690 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 FAM126BQ8IXS8 530 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 CCDC82Q8N4S0 544 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
PTPN7-210ENST00000477625 SNX14Q9Y5W7 946 aa14.14□□□□□ -0.15
PTPN7-210ENST00000477625 SZT2Q5T011 3432 aa14.13□□□□□ -0.15
PTPN7-210ENST00000477625 SOX1O00570 391 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-210ENST00000477625 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
PTPN7-210ENST00000477625 ZBTB43O43298 467 aa14.13□□□□□ -0.15
PTPN7-210ENST00000477625 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
PTPN7-210ENST00000477625 TIMP1P01033 207 aa14.13□□□□□ -0.15
PTPN7-210ENST00000477625 GH1P01241 217 aa14.13□□□□□ -0.15
PTPN7-210ENST00000477625 CD4P01730 458 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms