RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 DPF3Q92784 378 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 DDX11Q96FC9 970 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 PEX11GQ96HA9 241 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 RNF38Q9H0F5 515 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 CCSER2Q9H7U1 834 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 PODXL2Q9NZ53 605 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 NUDT5Q9UKK9 219 aa6.74□□□□□ -1.33
UBR3-209ENST00000477461 THBDP07204 575 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 INF2Q27J81 1249 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 LIPIQ6XZB0 460 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 PRRT2Q7Z6L0 340 aaPredicted RBP6.73□□□□□ -1.33
UBR3-209ENST00000477461 B3GNT8Q7Z7M8 397 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 SAPCD2Q86UD0 394 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 NETO2Q8NC67 525 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 DDX1Q92499 740 aaKnown RBP6.73□□□□□ -1.33
UBR3-209ENST00000477461 TSPAN17Q96FV3 270 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 TGIF2Q9GZN2 237 aa6.73□□□□□ -1.33
UBR3-209ENST00000477461 SMAD7O15105 426 aaKnown RBP6.72□□□□□ -1.33
UBR3-209ENST00000477461 HTRA3P83110 453 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 PLP2Q04941 152 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 SMAD4Q13485 552 aaKnown RBP6.72□□□□□ -1.33
UBR3-209ENST00000477461 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
UBR3-209ENST00000477461 STK32CQ86UX6 486 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 COPS5Q92905 334 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 TEPSINQ96N21 525 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 BDH2Q9BUT1 245 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 USP40Q9NVE5 1235 aa6.72□□□□□ -1.33
UBR3-209ENST00000477461 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
UBR3-209ENST00000477461 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
UBR3-209ENST00000477461 CACNB2Q08289 660 aaPredicted RBP6.71□□□□□ -1.34
UBR3-209ENST00000477461 RTP5Q14D33 572 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 SV2CQ496J9 727 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 C6orf15Q6UXA7 325 aaPredicted RBP6.71□□□□□ -1.34
UBR3-209ENST00000477461 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 PLEKHO2Q8TD55 490 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 BTN2A2Q8WVV5 523 aa6.71□□□□□ -1.34
UBR3-209ENST00000477461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
UBR3-209ENST00000477461 B2RBV5 119 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 C22orf46C9J442 243 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 TBX1O43435 398 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 ECI1P42126 302 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 CYP4F3Q08477 520 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 SLC9A5Q14940 896 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 NCAPHQ15003 741 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 UBXN11Q5T124 520 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 TRIM59Q8IWR1 403 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 FAM26EQ8N5C1 309 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 FRS2Q8WU20 508 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 MMP19Q99542 508 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 CYP26B1Q9NR63 512 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 SPATA6Q9NWH7 488 aaPredicted RBP6.7□□□□□ -1.34
UBR3-209ENST00000477461 LRP2BPQ9P2M1 347 aa6.7□□□□□ -1.34
UBR3-209ENST00000477461 TMEFF2Q9UIK5 374 aaPredicted RBP6.7□□□□□ -1.34
UBR3-209ENST00000477461 SGSM2O43147 1006 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 ZBTB7AO95365 584 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 CAP1Q01518 475 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 ERICH6BQ5W0A0 696 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 CD300LDQ6UXZ3 194 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 CARFQ8N187 725 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 CRACR2BQ8N4Y2 399 aaPredicted RBP6.69□□□□□ -1.34
UBR3-209ENST00000477461 MRGPRX3Q96LB0 322 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 STRIP2Q9ULQ0 834 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 DUSP10Q9Y6W6 482 aa6.69□□□□□ -1.34
UBR3-209ENST00000477461 SH3D21A4FU49 640 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 ARNTLO00327 626 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 DDAH1O94760 285 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBR3-209ENST00000477461 NAT2P11245 290 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 FPR2P25090 351 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 SARSP49591 514 aaKnown RBP6.68□□□□□ -1.34
UBR3-209ENST00000477461 SF1Q15637 639 aaKnown RBP6.68□□□□□ -1.34
UBR3-209ENST00000477461 CEP68Q76N32 757 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 GORASP1Q9BQQ3 440 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 NKX2-4Q9H2Z4 354 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 CAPN10Q9HC96 672 aa6.68□□□□□ -1.34
UBR3-209ENST00000477461 ITGAVP06756 1048 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 C8BP07358 591 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 SNRPB2P08579 225 aaKnown RBP6.67□□□□□ -1.34
UBR3-209ENST00000477461 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
UBR3-209ENST00000477461 ETFBP38117 255 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 BCL6P41182 706 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 PRSS53Q2L4Q9 553 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 FAM178BQ8IXR5 827 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 NPLOC4Q8TAT6 608 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 MICAL1Q8TDZ2 1067 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 CPA5Q8WXQ8 436 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 ACTR10Q9NZ32 417 aa6.67□□□□□ -1.34
UBR3-209ENST00000477461 TIMM13Q9Y5L4 95 aaPredicted RBP6.67□□□□□ -1.34
UBR3-209ENST00000477461 NOBOXO60393 691 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 CYP2C8P10632 490 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 CNR2P34972 360 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms