RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 LRRC15Q8TF66 581 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 LENG9Q96B70 501 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 DHX58Q96C10 678 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 HOMER2Q9NSB8 354 aa16.37■□□□□ 0.21
COL4A6-206ENST00000477085 CXCL11O14625 94 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 CYP3A4P08684 503 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 FDX1P10109 184 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 PPIL2Q13356 520 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 ELOA2Q8IYF1 753 aaPredicted RBP16.36■□□□□ 0.21
COL4A6-206ENST00000477085 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 PTPRFP10586 1907 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
COL4A6-206ENST00000477085 CIITAP33076 1130 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 KARSQ15046 597 aaKnown RBP16.36■□□□□ 0.21
COL4A6-206ENST00000477085 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
COL4A6-206ENST00000477085 TRERF1Q96PN7 1200 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 MMTAG2Q9BU76 263 aaKnown RBP16.36■□□□□ 0.21
COL4A6-206ENST00000477085 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
COL4A6-206ENST00000477085 HOXA7P31268 230 aaPredicted RBP16.35■□□□□ 0.21
COL4A6-206ENST00000477085 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL4A6-206ENST00000477085 UBXN2AP68543 259 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 L1TD1Q5T7N2 865 aaKnown RBP16.35■□□□□ 0.21
COL4A6-206ENST00000477085 PDXDC2PQ6P474 469 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 MOXD1Q6UVY6 613 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 GADL1Q6ZQY3 521 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 SH3RF1Q7Z6J0 888 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 MTRQ99707 1265 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 HOXC10Q9NYD6 342 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 TUBE1Q9UJT0 475 aa16.35■□□□□ 0.21
COL4A6-206ENST00000477085 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 SLFN14P0C7P3 912 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 Q4G0T1 1027 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 PRR16Q569H4 304 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 NAALADL2Q58DX5 795 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 ETNPPLQ8TBG4 499 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 SYTL5Q8TDW5 730 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 PAGE5Q96GU1 130 aa16.34■□□□□ 0.21
COL4A6-206ENST00000477085 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
COL4A6-206ENST00000477085 CASP1P29466 404 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 OAZ1P54368 228 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 GPAT2Q6NUI2 795 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 C11orf57Q6ZUT1 292 aaPredicted RBP16.33■□□□□ 0.21
COL4A6-206ENST00000477085 AK8Q96MA6 479 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 NAP1L4Q99733 375 aaKnown RBP16.33■□□□□ 0.21
COL4A6-206ENST00000477085 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 MYPNQ86TC9 1320 aa16.33■□□□□ 0.21
COL4A6-206ENST00000477085 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 COL11A1P12107 1806 aaPredicted RBP16.33■□□□□ 0.2
COL4A6-206ENST00000477085 POTEMA6NI47 508 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 BIN1O00499 593 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
COL4A6-206ENST00000477085 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
COL4A6-206ENST00000477085 POSTNQ15063 836 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 CST9Q5W186 159 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 ISM2Q6H9L7 571 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 SLC10A4Q96EP9 437 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 PLIN2Q99541 437 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 CTDP1Q9Y5B0 961 aaPredicted RBP16.33■□□□□ 0.2
COL4A6-206ENST00000477085 RPTORQ8N122 1335 aa16.33■□□□□ 0.2
COL4A6-206ENST00000477085 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
COL4A6-206ENST00000477085 BMP6P22004 513 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 UBA7P41226 1012 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 PDIA5Q14554 519 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 CABP7Q86V35 215 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 STAMQ92783 540 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 TAAR1Q96RJ0 339 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 AGTPBP1Q9UPW5 1226 aa16.32■□□□□ 0.2
COL4A6-206ENST00000477085 MSH4O15457 936 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 AFMP43652 599 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 IQUBQ8NA54 791 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-206ENST00000477085 CBX8Q9HC52 389 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
COL4A6-206ENST00000477085 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms