RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 LAMA3Q16787 3333 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 HOXA13P31271 388 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ADCYAP1R1P41586 468 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 LRRC41Q15345 812 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 CCSAPQ6IQ19 270 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 BRF1Q92994 677 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ZHX1Q9UKY1 873 aaPredicted RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ABCB11O95342 1321 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ADAMTS3O15072 1205 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 DTNBO60941 627 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 SMARCA1P28370 1054 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 HSD17B4P51659 736 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 EVCP57679 992 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 BLOC1S2Q6QNY1 142 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ANKLE1Q8NAG6 615 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 GNEQ9Y223 722 aaKnown RBP10.44□□□□□ -0.74
SSX2IP-206ENST00000476905 DPYSL4O14531 572 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 PPFIA3O75145 1194 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 SMPD1P17405 629 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 RUFY3Q7L099 469 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 KLHDC9Q8NEP7 349 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 CTCFLQ8NI51 663 aaPredicted RBP10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 CNPY2Q9Y2B0 182 aa10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 MRPL11Q9Y3B7 192 aaKnown RBP10.43□□□□□ -0.74
SSX2IP-206ENST00000476905 CNTNAP5Q8WYK1 1306 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 ZBTB43O43298 467 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 CFBP00751 764 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 HMGB1P09429 215 aaKnown RBP10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 NTRK3Q16288 839 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 LRRC26Q2I0M4 334 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 NECAB2Q7Z6G3 386 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 SYNRGQ9UMZ2 1314 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 ASB14A6NK59 587 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 MEIS2O14770 477 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 MSCO60682 206 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 RGS20O76081 388 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 ARIH2O95376 493 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 AKR1A1P14550 325 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 PDIA3P30101 505 aaKnown RBP10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 KIF5BP33176 963 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 C11orf49Q9H6J7 331 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 XPNPEP3Q9NQH7 507 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
SSX2IP-206ENST00000476905 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 RTN1Q16799 776 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 USP17L6PQ6QN14 398 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 GPKOWQ92917 476 aaPredicted RBP eCLIP10.41□□□□□ -0.743e-7■■■□□ 17.5
SSX2IP-206ENST00000476905 FERMT2Q96AC1 680 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 SENP6Q9GZR1 1112 aaPredicted RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 ALPK3Q96L96 1907 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 GOLGA8AA7E2F4 631 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 GOLGA8BA8MQT2 603 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 H0YGN5 161 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 DNM1LO00429 736 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 CALM1P0DP23 149 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 CALM2P0DP24 149 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 CALM3P0DP25 149 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 RARBP10826 455 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 FECHP22830 423 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 ATN1P54259 1190 aaPredicted RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 NKX3-2P78367 333 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 MCM6Q14566 821 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 PKN1Q16512 942 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 DNERQ8NFT8 737 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 COPS5Q92905 334 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 KIF2CQ99661 725 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 LZTS2Q9BRK4 669 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 UPF3AQ9H1J1 476 aaKnown RBP10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 BCAS3Q9H6U6 928 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 FRMPD3Q5JV73 1810 aa10.41□□□□□ -0.74
SSX2IP-206ENST00000476905 SZT2Q5T011 3432 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 A6NJR5 290 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 EIF2AK2P19525 551 aaKnown RBP10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 PSMA5P28066 241 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 GNAQP50148 359 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 GJA9P57773 515 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 BEX3Q00994 111 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 TNFAIP2Q03169 654 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 CCDC62Q6P9F0 684 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 MCF2L2Q86YR7 1114 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 PDCD2LQ9BRP1 358 aa10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
SSX2IP-206ENST00000476905 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms