RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 ADH1CP00326 375 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 F2P00734 622 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 MUTP22033 750 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ETFBP38117 255 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 SMTNP53814 917 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 PLTPP55058 493 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TGFB2P61812 414 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 MTX1Q13505 466 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 RABEP1Q15276 862 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ISM2Q6H9L7 571 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 SHQ1Q6PI26 577 aaKnown RBP6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 TBC1D21Q8IYX1 336 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 C2orf69Q8N8R5 385 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 MSANTD4Q8NCY6 345 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ZNF540Q8NDQ6 660 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ZNF606Q8WXB4 792 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 LPIN2Q92539 896 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GPKOWQ92917 476 aaPredicted RBP eCLIP6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 NXPE3Q969Y0 559 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 RELTQ969Z4 430 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GIMAP5Q96F15 307 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 PSKH2Q96QS6 385 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 ARHGAP9Q9BRR9 750 aa6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 NSRP1Q9H0G5 558 aaKnown RBP6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
SPTLC3-205ENST00000476791 SLC12A8A0AV02 714 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 P4HA2O15460 535 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 ZW10O43264 779 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 TSPAN1O60635 241 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 SKAP2O75563 359 aaPredicted RBP6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 CAPN3P20807 821 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 RXRGP48443 463 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 CTCFP49711 727 aaPredicted RBP6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 LMNB2Q03252 620 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 CACNB2Q08289 660 aaPredicted RBP6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 SSPNQ14714 243 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 ANKRD1Q15327 319 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 SPOCD1Q6ZMY3 1216 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 GBP6Q6ZN66 633 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 ZNF600Q6ZNG1 722 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 INTS8Q75QN2 995 aaKnown RBP6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 STRA8Q7Z7C7 330 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 RTKN2Q8IZC4 609 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 TEKT4Q8WW24 435 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 CDK15Q96Q40 435 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 HERC2P3Q9BVR0 1158 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 SLC13A1Q9BZW2 595 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 MCM8Q9UJA3 840 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 PCDHGC5Q9Y5F6 944 aa6.63□□□□□ -1.35
SPTLC3-205ENST00000476791 CYP2D7A0A087X1C5 515 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC85CA6NKD9 419 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ERC2O15083 957 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 SGSM2O43147 1006 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 RLBP1P12271 317 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 FERP16591 822 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 NF2P35240 595 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CDK17Q00537 523 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 BECN1Q14457 450 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 PLCB4Q15147 1175 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ERFEQ4G0M1 354 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ARHGAP45Q92619 1136 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ARMC5Q96C12 935 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 DNAJC18Q9H819 358 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ATP13A2Q9NQ11 1180 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ANKEF1Q9NU02 776 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CASQ2O14958 399 aaPredicted RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CPP00450 1065 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 IFIT2P09913 472 aaKnown RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 UBL4AP11441 157 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 BMP1P13497 986 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 HNF1BP35680 557 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 USP8P40818 1118 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CUL4BQ13620 913 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 PCSK7Q16549 785 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 TATDN1Q6P1N9 297 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CORO6Q6QEF8 472 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 RSRC2Q7L4I2 434 aaKnown RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 VASH1Q7L8A9 365 aaPredicted RBP6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 ZBTB33Q86T24 672 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 CCDC148Q8NFR7 591 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 C1QTNF2Q9BXJ5 285 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 TGIF2Q9GZN2 237 aa6.62□□□□□ -1.35
SPTLC3-205ENST00000476791 NDC80O14777 642 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 ADAMTS4O75173 837 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 NR3C2P08235 984 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 FSHRP23945 695 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 CHKAP35790 457 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 GRM5P41594 1212 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 MYL6P60660 151 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 RACK1P63244 317 aaKnown RBP6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 LRRC74AQ0VAA2 488 aa6.61□□□□□ -1.35
SPTLC3-205ENST00000476791 NFIAQ12857 509 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms