RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 INCENPQ9NQS7 918 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 LMCD1Q9NZU5 365 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 NOD1Q9Y239 953 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 RAD50Q92878 1312 aa19.46■□□□□ 0.71
APOBEC3F-203ENST00000476513 GPNMBQ14956 572 aa19.45■□□□□ 0.7
APOBEC3F-203ENST00000476513 GPATCH3Q96I76 525 aa19.45■□□□□ 0.7
APOBEC3F-203ENST00000476513 CHMP4BQ9H444 224 aaKnown RBP19.45■□□□□ 0.7
APOBEC3F-203ENST00000476513 TET1Q8NFU7 2136 aa19.45■□□□□ 0.7
APOBEC3F-203ENST00000476513 CALML3P27482 149 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 PDE4DQ08499 809 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 PTGISQ16647 500 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 LRRFIP1Q32MZ4 808 aaKnown RBP19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 SYDE2Q5VT97 1194 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 BTNL9Q6UXG8 535 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 SCFD2Q8WU76 684 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 DCAF4Q8WV16 495 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 CLEC4DQ8WXI8 215 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 CTAGE1Q96RT6 745 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 ZBED2Q9BTP6 218 aa19.44■□□□□ 0.7
APOBEC3F-203ENST00000476513 TANC1Q9C0D5 1861 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 EDNRBP24530 442 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 NOVP48745 357 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 CHMP4BP1P59074 171 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 DEFB103AP81534 67 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 CAGE1Q8TC20 777 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 AFAP1L1Q8TED9 768 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 UBE2ZQ9H832 354 aaPredicted RBP19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 SUGCTQ9HAC7 445 aa19.43■□□□□ 0.7
APOBEC3F-203ENST00000476513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 TXNP10599 105 aaKnown RBP19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 RNF207Q6ZRF8 634 aa19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 ALYREFQ86V81 257 aaKnown RBP19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 CCDC155Q8N6L0 562 aa19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 MTUS1Q9ULD2 1270 aa19.42■□□□□ 0.7
APOBEC3F-203ENST00000476513 FOXP2O15409 715 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 RANBP6O60518 1105 aaKnown RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 ARIH2O95376 493 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 SELPP16109 830 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 ERVK-21P61565 698 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 RPS6P62753 249 aaKnown RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 TCTN1Q2MV58 587 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 ZMYM1Q5SVZ6 1142 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 GDF6Q6KF10 455 aaPredicted RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 CNKSR3Q6P9H4 555 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 LRRC8DQ7L1W4 858 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 FAM178BQ8IXR5 827 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 GJD3Q8N144 294 aa19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 DHX38Q92620 1227 aaKnown RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 TGS1Q96RS0 853 aaKnown RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 FRMPD2Q68DX3 1309 aaPredicted RBP19.41■□□□□ 0.7
APOBEC3F-203ENST00000476513 PRR33A8MZF0 331 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 GJB5O95377 273 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 CXCL10P02778 98 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 LEXMQ3ZCV2 418 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 DNERQ8NFT8 737 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 MPHOSPH6Q99547 160 aaKnown RBP19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 RAD9AQ99638 391 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 GPCPD1Q9NPB8 672 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 PTPRSQ13332 1948 aa19.4■□□□□ 0.7
APOBEC3F-203ENST00000476513 LINC01553A4QN01 128 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 NBNO60934 754 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 KCNA5P22460 613 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 RBL2Q08999 1139 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 SESTD1Q86VW0 696 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 AFG1LQ8WV93 481 aa19.39■□□□□ 0.69
APOBEC3F-203ENST00000476513 ABHD14A-ACY1A0A1B0GW23 586 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 RBAK-RBAKDNI3L0D1 243 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 ORC4O43929 436 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 CCDC62Q6P9F0 684 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 KAT2BQ92831 832 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 FSD1Q9BTV5 496 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 ANAPC4Q9UJX5 808 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 PNMA2Q9UL42 364 aa19.38■□□□□ 0.69
APOBEC3F-203ENST00000476513 PARNO95453 639 aaKnown RBP19.37■□□□□ 0.69
APOBEC3F-203ENST00000476513 MMP3P08254 477 aa19.37■□□□□ 0.69
APOBEC3F-203ENST00000476513 CKBP12277 381 aa19.37■□□□□ 0.69
APOBEC3F-203ENST00000476513 IL9P15248 144 aa19.37■□□□□ 0.69
APOBEC3F-203ENST00000476513 WDR19Q8NEZ3 1342 aa19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 B4DLN1 442 aa19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 FGRP09769 529 aa19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 SSTR3P32745 418 aaPredicted RBP19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 MRPL12P52815 198 aaKnown RBP19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 PTCRAQ6ISU1 281 aaPredicted RBP19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 FAM117BQ6P1L5 589 aa19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 PI4K2BQ8TCG2 481 aa19.36■□□□□ 0.69
APOBEC3F-203ENST00000476513 TRIP12Q14669 1992 aaPredicted RBP19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 TTC41PQ6P2S7 1318 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 EFCAB14O75071 495 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 GH1P01241 217 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 PDHBP11177 359 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 ARHGAP1Q07960 439 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 LY6KQ17RY6 165 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 C20orf194Q5TEA3 1177 aa19.35■□□□□ 0.69
APOBEC3F-203ENST00000476513 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms