RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 OSBP2Q969R2 916 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 PTCHD1Q96NR3 888 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 CLEC1BQ9P126 229 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 IMPACTQ9P2X3 320 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 SMARCA5O60264 1052 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-211ENST00000476215 DLX3O60479 287 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 TBC1D8O95759 1140 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 PLS3P13797 630 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 PRKCAP17252 672 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 L1CAMP32004 1257 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 MVKQ03426 396 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 SQSTM1Q13501 440 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 SCUBE1Q8IWY4 988 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 SIRT2Q8IXJ6 389 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 EXOC2Q96KP1 924 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 KLHL14Q9P2G3 628 aa7.32□□□□□ -1.24
PTCD3-211ENST00000476215 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 ESYT3A0FGR9 886 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 SRGAP3O43295 1099 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 MPOP05164 745 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 PAMP19021 973 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 VIPR1P32241 457 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 ARL4AP40617 200 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 CYP4F8P98187 520 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 MAP4K2Q12851 820 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 OLFML2BQ68BL8 750 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 NUP43Q8NFH3 380 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 NPLOC4Q8TAT6 608 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 DHRS4Q9BTZ2 278 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 CNTD2Q9H8S5 307 aa7.31□□□□□ -1.24
PTCD3-211ENST00000476215 TRBV23OR9-2A0A075B6M9 112 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 IRS4O14654 1257 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-211ENST00000476215 MEFVO15553 781 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-211ENST00000476215 SUMO1P63165 101 aaKnown RBP7.3□□□□□ -1.24
PTCD3-211ENST00000476215 TMEM62Q0P6H9 643 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 SLC35F1Q5T1Q4 408 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 USP53Q70EK8 1073 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 JAMLQ86YT9 394 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 PPIL6Q8IXY8 311 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 NLGN1Q8N2Q7 840 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 C1orf159Q96HA4 380 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 FANCLQ9NW38 375 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 TMEM260Q9NX78 707 aa7.3□□□□□ -1.24
PTCD3-211ENST00000476215 MRPS23Q9Y3D9 190 aaKnown RBP7.3□□□□□ -1.24
PTCD3-211ENST00000476215 BLACEA4D250 179 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 MSL3P1P0C860 447 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 SRSF3P84103 164 aaKnown RBP7.29□□□□□ -1.24
PTCD3-211ENST00000476215 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
PTCD3-211ENST00000476215 DENND5AQ6IQ26 1287 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 SDE2Q6IQ49 451 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 HOMER1Q86YM7 354 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 CPNE8Q86YQ8 564 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 APPBP2Q92624 585 aa7.29□□□□□ -1.24
PTCD3-211ENST00000476215 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 N4BP3O15049 544 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 CDC45O75419 566 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 NR1I3Q14994 352 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 E4F1Q66K89 784 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-211ENST00000476215 KISS1RQ969F8 398 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-211ENST00000476215 SGPP1Q9BX95 441 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 PDLIM7Q9NR12 457 aa7.28□□□□□ -1.24
PTCD3-211ENST00000476215 TMEFF2Q9UIK5 374 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-211ENST00000476215 LOC105371045A0A1W2PR82 267 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 ZSCAN22P10073 491 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-211ENST00000476215 SDHBP21912 280 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 MAPKAPK2P49137 400 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 NTRK3Q16288 839 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 ACBD5Q5T8D3 534 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-211ENST00000476215 CIAPIN1Q6FI81 312 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 IQCEQ6IPM2 695 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 RPTNQ6XPR3 784 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 CCDC103Q8IW40 242 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 DIO2Q92813 273 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 SIGLEC10Q96LC7 697 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 MMP19Q99542 508 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 RAPGEFL1Q9UHV5 662 aa7.27□□□□□ -1.25
PTCD3-211ENST00000476215 ARNTLO00327 626 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 ENPP3O14638 875 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 ASMTLO95671 621 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 CYBBP04839 570 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 DBHP09172 617 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 FBLN1P23142 703 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 LTBRP36941 435 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 CDR1P51861 262 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 KCNAB2Q13303 367 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 INF2Q27J81 1249 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 PLEKHN1Q494U1 663 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-211ENST00000476215 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 MBLAC2Q68D91 279 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 TMEM132EQ6IEE7 984 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 DCAF4Q8WV16 495 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 SIRT5Q9NXA8 310 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 PCDHA5Q9Y5H7 936 aa7.26□□□□□ -1.25
PTCD3-211ENST00000476215 A0A1W2PQ27 194 aa7.25□□□□□ -1.25
PTCD3-211ENST00000476215 A0A1W2PQ64 194 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms