RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	SPIRE2	Q8WWL2	714 aa		8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	ATOH1	Q92858	354 aa	Predicted RBP	8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	POP1	Q99575	1024 aa	Known RBP	8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	ABHD16B	Q9H3Z7	469 aa		8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	ALG13	Q9NP73	1137 aa	Known RBP	8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	MUTYH	Q9UIF7	546 aa		8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	AKAP2	Q9Y2D5	859 aa		8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	KMT2B	Q9UMN6	2715 aa	Predicted RBP	8.77	□□□□□ -1.01
HDAC9-223	ENST00000476135	DNAJC25-GNG10	A0A024R161	153 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135		H3BQ06	376 aa	Predicted RBP	8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	IGSF3	O75054	1194 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	BAIAP3	O94812	1187 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	SUPT20HL2	P0C7V6	817 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	STAT3	P40763	770 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	BEX3	Q00994	111 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	SEPT2	Q15019	361 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	PI16	Q6UXB8	463 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	FBXL6	Q8N531	539 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	MAGEB6	Q8N7X4	407 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	TGS1	Q96RS0	853 aa	Known RBP	8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	GMPR2	Q9P2T1	348 aa	Known RBP	8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	TNKS	O95271	1327 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	CACNA1H	O95180	2353 aa		8.76	□□□□□ -1.01
HDAC9-223	ENST00000476135	MCM3AP	O60318	1980 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	LCHN	A4D1U4	455 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	ZEB2	O60315	1214 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	ARID4A	P29374	1257 aa	Predicted RBP	8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	SHMT1	P34896	483 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	KCNJ6	P48051	423 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	WNT7B	P56706	349 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	COL19A1	Q14993	1142 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	AMHR2	Q16671	573 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	KIAA1755	Q5JYT7	1200 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	ASCL5	Q7RTU5	278 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	TTC6	Q86TZ1	520 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	RNF135	Q8IUD6	432 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	PABPC5	Q96DU9	382 aa	Known RBP	8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	DDX11	Q96FC9	970 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	COPRS	Q9NQ92	184 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	CTNNA3	Q9UI47	895 aa		8.75	□□□□□ -1.01
HDAC9-223	ENST00000476135	TANC1	Q9C0D5	1861 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	PRR23A	A6NEV1	266 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	WDR46	O15213	610 aa	Known RBP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	NDUFV2	P19404	249 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	ADGRA1	Q86SQ6	560 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	MRPL38	Q96DV4	380 aa	Known RBP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	FTO	Q9C0B1	505 aa	Known RBP eCLIP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	ZNF214	Q9UL59	606 aa	Predicted RBP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	PA2G4	Q9UQ80	394 aa	Known RBP	8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	FAM186A	A6NE01	2351 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	ASTN1	O14525	1302 aa		8.74	□□□□□ -1.01
HDAC9-223	ENST00000476135	RIF1	Q5UIP0	2472 aa	Known RBP	8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	COL4A6	Q14031	1691 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	LINC01553	A4QN01	128 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	VWA5A	O00534	786 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	UQCRFS1P1	P0C7P4	283 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	CYP2C9	P11712	490 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	MCAM	P43121	646 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	DYNLL1	P63167	89 aa	Known RBP	8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	TNFAIP2	Q03169	654 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	SMAD2	Q15796	467 aa	Known RBP	8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	FSCN1	Q16658	493 aa	Known RBP	8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	PTPRO	Q16827	1216 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	TIGD5	Q53EQ6	642 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	GORAB	Q5T7V8	394 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	CERS3	Q8IU89	383 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	WDR63	Q8IWG1	891 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	REPS2	Q8NFH8	660 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	TET1	Q8NFU7	2136 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	HPS1	Q92902	700 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	NEUROD6	Q96NK8	337 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	RAD9A	Q99638	391 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	FSD1	Q9BTV5	496 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	KATNBL1	Q9H079	304 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	AP5M1	Q9H0R1	490 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	SH2D4A	Q9H788	454 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	VCPKMT	Q9H867	229 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	MTUS1	Q9ULD2	1270 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	GNE	Q9Y223	722 aa	Known RBP	8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	TMX2	Q9Y320	296 aa		8.73	□□□□□ -1.01
HDAC9-223	ENST00000476135	EPG5	Q9HCE0	2579 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	MPHOSPH10	O00566	681 aa	Known RBP	8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	NCK2	O43639	380 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	IQCF3	P0C7M6	154 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	AVPR2	P30518	371 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	NBL1	P41271	181 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	USP5	P45974	858 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	WDR5	P61964	334 aa	Known RBP	8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	PSMC6	P62333	389 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	ZXDA	P98168	799 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	GABPA	Q06546	454 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	TFCP2	Q12800	502 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	ARMCX2	Q7L311	632 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	TLK2	Q86UE8	772 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	SPICE1	Q8N0Z3	855 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	RETREG2	Q8NC44	543 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	FGD4	Q96M96	766 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	ARHGEF10L	Q9HCE6	1279 aa		8.72	□□□□□ -1.01
HDAC9-223	ENST00000476135	TRMT13	Q9NUP7	481 aa	Known RBP	8.72	□□□□□ -1.01

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