RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 GNASQ5JWF2 1037 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 TAPT1Q6NXT6 567 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 TMEM87BQ96K49 555 aa13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 DDX49Q9Y6V7 483 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-206ENST00000475952 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 PRC1O43663 620 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 ZEB2O60315 1214 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 CLTBP09497 229 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 SMPD1P17405 629 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 EDNRBP24530 442 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 KIF5BP33176 963 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 PLA2G5P39877 138 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 GRIN2CQ14957 1233 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 IGDCC4Q8TDY8 1250 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 RIOX1Q9H6W3 641 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 LY9Q9HBG7 655 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 PDGFCQ9NRA1 345 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 Q9Y3F1 56 aa13.22□□□□□ -0.29
NUDCD3-206ENST00000475952 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 CABYRO75952 493 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 CFBP00751 764 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 ITGB8P26012 769 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 EPHB4P54760 987 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 BEX3Q00994 111 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 TLE2Q04725 743 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 PIGSQ96S52 555 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 TCF20Q9UGU0 1960 aaKnown RBP13.21□□□□□ -0.29
NUDCD3-206ENST00000475952 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 DCDC2CA8MYV0 355 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 NKRFO15226 690 aaKnown RBP eCLIP13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 CTAGE5O15320 804 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 DYNC1LI2O43237 492 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 LIFRP42702 1097 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 CPT1AP50416 773 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 RMDN3Q96TC7 470 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
NUDCD3-206ENST00000475952 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 TLR3O15455 904 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 CYTH3O43739 400 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 CALM1P0DP23 149 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 CALM2P0DP24 149 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 CALM3P0DP25 149 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 RAG1P15918 1043 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 DNAJB2P25686 324 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 GNAQP50148 359 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 HSD17B4P51659 736 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 GHRHRQ02643 423 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 KRT32Q14532 448 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 SPZ1Q9BXG8 430 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 TMEM39AQ9NV64 488 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
NUDCD3-206ENST00000475952 ARVCFO00192 962 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 OPLAHO14841 1288 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 KIAA0355O15063 1070 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 STXBP2Q15833 593 aa13.18□□□□□ -0.3
NUDCD3-206ENST00000475952 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms