RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 TMEM63BQ5T3F8 832 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 ZNF589Q86UQ0 364 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-208ENST00000475795 PLPP6Q8IY26 295 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 HERVK_113Q902F9 699 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 DDX27Q96GQ7 796 aaKnown RBP8.48□□□□□ -1.05
UBE4B-208ENST00000475795 PURBQ96QR8 312 aaKnown RBP8.48□□□□□ -1.05
UBE4B-208ENST00000475795 PBX4Q9BYU1 374 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 WDR70Q9NW82 654 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 ADD3Q9UEY8 706 aaKnown RBP8.48□□□□□ -1.05
UBE4B-208ENST00000475795 MYH7BA7E2Y1 1941 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 UMODL1Q5DID0 1318 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 FRMPD2Q68DX3 1309 aaPredicted RBP8.48□□□□□ -1.05
UBE4B-208ENST00000475795 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 NCOR1O75376 2440 aa8.48□□□□□ -1.05
UBE4B-208ENST00000475795 TET1Q8NFU7 2136 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 RBM47A0AV96 593 aaKnown RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 PTPDC1A2A3K4 754 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 B4GALT4O60513 344 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 PCP11498 1178 aaKnown RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 HAND2P61296 217 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 PSMC6P62333 389 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 NMIQ13287 307 aaPredicted RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 RAB30Q15771 203 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 CLEC4DQ8WXI8 215 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 TTC14Q96N46 770 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 NOC4LQ9BVI4 516 aaKnown RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 TRPV6Q9H1D0 765 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 MTIF3Q9H2K0 278 aaKnown RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 GPCPD1Q9NPB8 672 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 PNMA2Q9UL42 364 aa8.47□□□□□ -1.05
UBE4B-208ENST00000475795 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
UBE4B-208ENST00000475795 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 FGBP02675 491 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 SNHG28P0DPA3 235 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 CALML3P27482 149 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 CPT1AP50416 773 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 CCL23P55773 120 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.06
UBE4B-208ENST00000475795 ZNF543Q08ER8 600 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 SLC30A10Q6XR72 485 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 RNF207Q6ZRF8 634 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 TBC1D10CQ8IV04 446 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-208ENST00000475795 WDR11Q9BZH6 1224 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 LNPKQ9C0E8 428 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 WNT8AQ9H1J5 351 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 ALDH8A1Q9H2A2 487 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-208ENST00000475795 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 CXXC1Q9P0U4 656 aaPredicted RBP8.46□□□□□ -1.06
UBE4B-208ENST00000475795 MSRAQ9UJ68 235 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 WDR19Q8NEZ3 1342 aa8.46□□□□□ -1.06
UBE4B-208ENST00000475795 PTPRSQ13332 1948 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 NKRFO15226 690 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 SUPT20HL2P0C7V6 817 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 EDNRBP24530 442 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 NT5C2P49902 561 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 RPS6P62753 249 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 FOXK1P85037 733 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 PDE4DQ08499 809 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 PPP2R5BQ15173 497 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 GPATCH4Q5T3I0 446 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 OTOP2Q7RTS6 562 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 DNERQ8NFT8 737 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 OR6J1Q8NGC5 347 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 VWCEQ96DN2 955 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 MPHOSPH6Q99547 160 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 MTG1Q9BT17 334 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 RNF41Q9H4P4 317 aaPredicted RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 TRMT13Q9NUP7 481 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 YBX2Q9Y2T7 364 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 TNKSO95271 1327 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 NEDD4P46934 1319 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 RAD50Q92878 1312 aa8.45□□□□□ -1.06
UBE4B-208ENST00000475795 PRRC2BQ5JSZ5 2229 aaKnown RBP8.45□□□□□ -1.06
UBE4B-208ENST00000475795 BAZ2BQ9UIF8 2168 aaKnown RBP8.44□□□□□ -1.06
UBE4B-208ENST00000475795 B4DLN1 442 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 PFKMP08237 780 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 MYL3P08590 195 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 SDSP20132 328 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
UBE4B-208ENST00000475795 AAMPQ13685 434 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 BRDTQ58F21 947 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-208ENST00000475795 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 DGKHQ86XP1 1220 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 SMC5Q8IY18 1101 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 RGS22Q8NE09 1264 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 SCFD2Q8WU76 684 aa8.44□□□□□ -1.06
UBE4B-208ENST00000475795 ESR2Q92731 530 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms