RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 NOD1Q9Y239 953 aa18.79■□□□□ 0.6
ITGB1-211ENST00000475184 MYH6P13533 1939 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 A6NJR5 290 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 GPR37L1O60883 481 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 CALML3P27482 149 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 SLC16A2P36021 539 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 PDE4DQ08499 809 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 SYDE2Q5VT97 1194 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 TTBK2Q6IQ55 1244 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 MYH7BA7E2Y1 1941 aa18.78■□□□□ 0.6
ITGB1-211ENST00000475184 LCHNA4D1U4 455 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 FAM86C2PA6NEL3 165 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 BTNL9Q6UXG8 535 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 GDPD5Q8WTR4 605 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 MPHOSPH6Q99547 160 aaKnown RBP18.77■□□□□ 0.6
ITGB1-211ENST00000475184 INCENPQ9NQS7 918 aa18.77■□□□□ 0.6
ITGB1-211ENST00000475184 RANBP6O60518 1105 aaKnown RBP18.76■□□□□ 0.59
ITGB1-211ENST00000475184 EDNRBP24530 442 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 NOVP48745 357 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 WDR5P61964 334 aaKnown RBP18.76■□□□□ 0.59
ITGB1-211ENST00000475184 PTGISQ16647 500 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 ZMYM1Q5SVZ6 1142 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 RNF207Q6ZRF8 634 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 CAGE1Q8TC20 777 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 AFAP1L1Q8TED9 768 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 COPS5Q92905 334 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 LMCD1Q9NZU5 365 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 MICAL3Q7RTP6 2002 aa18.76■□□□□ 0.59
ITGB1-211ENST00000475184 FOXP2O15409 715 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 TXNP10599 105 aaKnown RBP18.75■□□□□ 0.59
ITGB1-211ENST00000475184 CHMP4BP1P59074 171 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 TMCO2Q7Z6W1 182 aaPredicted RBP18.75■□□□□ 0.59
ITGB1-211ENST00000475184 ZBED2Q9BTP6 218 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 FSD1Q9BTV5 496 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 DCTPP1Q9H773 170 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 CD320Q9NPF0 282 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 WDFY4Q6ZS81 3184 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 TRIOO75962 3097 aa18.75■□□□□ 0.59
ITGB1-211ENST00000475184 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
ITGB1-211ENST00000475184 PI4K2BG5E9Z4 385 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 RPS6P62753 249 aaKnown RBP18.74■□□□□ 0.59
ITGB1-211ENST00000475184 DNERQ8NFT8 737 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 CTAGE1Q96RT6 745 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 GPCPD1Q9NPB8 672 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 PNMA2Q9UL42 364 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 MYO7AQ13402 2215 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
ITGB1-211ENST00000475184 ORC4O43929 436 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 SELPP16109 830 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 DEFB103AP81534 67 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 GPNMBQ14956 572 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 UBE2ZQ9H832 354 aaPredicted RBP18.73■□□□□ 0.59
ITGB1-211ENST00000475184 ANAPC4Q9UJX5 808 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 MTUS1Q9ULD2 1270 aa18.73■□□□□ 0.59
ITGB1-211ENST00000475184 B4DLN1 442 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 ARIH2O95376 493 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 TOP1P11387 765 aaKnown RBP18.72■□□□□ 0.59
ITGB1-211ENST00000475184 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
ITGB1-211ENST00000475184 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 GDF6Q6KF10 455 aaPredicted RBP18.72■□□□□ 0.59
ITGB1-211ENST00000475184 CNKSR3Q6P9H4 555 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 LRRC8DQ7L1W4 858 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 TMEM47Q9BQJ4 181 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 SUGCTQ9HAC7 445 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
ITGB1-211ENST00000475184 GJB5O95377 273 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 PARNO95453 639 aaKnown RBP18.71■□□□□ 0.59
ITGB1-211ENST00000475184 MMP3P08254 477 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
ITGB1-211ENST00000475184 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
ITGB1-211ENST00000475184 RAD9AQ99638 391 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 C5orf42Q9H799 3197 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 NLRC5Q86WI3 1866 aa18.71■□□□□ 0.59
ITGB1-211ENST00000475184 ABHD14A-ACY1A0A1B0GW23 586 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 LINC01553A4QN01 128 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 CXCL10P02778 98 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 FGRP09769 529 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 PDHBP11177 359 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 ERVK-21P61565 698 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 RBL2Q08999 1139 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 CCDC62Q6P9F0 684 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 TOMM22Q9NS69 142 aa18.7■□□□□ 0.58
ITGB1-211ENST00000475184 ZNF318Q5VUA4 2279 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.69■□□□□ 0.58
ITGB1-211ENST00000475184 NBNO60934 754 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 CKBP12277 381 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 KCNA5P22460 613 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 ARHGAP1Q07960 439 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 LEXMQ3ZCV2 418 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 GJD3Q8N144 294 aa18.69■□□□□ 0.58
ITGB1-211ENST00000475184 KAT2BQ92831 832 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms