RNA–Protein interactions for RNA: ENST00000475116.1

ERCC6-206, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-206ENST00000475116 HMGB1P09429 215 aaKnown RBP10.56□□□□□ -0.72
ERCC6-206ENST00000475116 POLR2MP0CAP2 368 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 CST5P28325 142 aaPredicted RBP10.56□□□□□ -0.72
ERCC6-206ENST00000475116 HSD17B4P51659 736 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
ERCC6-206ENST00000475116 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
ERCC6-206ENST00000475116 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 CXCL17Q6UXB2 119 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 SGMS1Q86VZ5 419 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 FCHSD1Q86WN1 690 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 SPZ1Q9BXG8 430 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 MAF1Q9H063 256 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
ERCC6-206ENST00000475116 BRPF3Q9ULD4 1205 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 SNX14Q9Y5W7 946 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 ALPK3Q96L96 1907 aa10.56□□□□□ -0.72
ERCC6-206ENST00000475116 TRIOBPQ9H2D6 2365 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 KLF18A0A0U1RQI7 1052 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 ZEB2O60315 1214 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 NR3C2P08235 984 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 TXNP10599 105 aaKnown RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 SMARCA1P28370 1054 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 SNX17Q15036 470 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 PPP2R5BQ15173 497 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 STXBP2Q15833 593 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 C1orf53Q5VUE5 145 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 APOA5Q6Q788 366 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 OR6J1Q8NGC5 347 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 SCFD2Q8WU76 684 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 COPS5Q92905 334 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 KCNB2Q92953 911 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 GDF15Q99988 308 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 LBHD1Q9BQE6 289 aaPredicted RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 UBE2OQ9C0C9 1292 aaKnown RBP10.55□□□□□ -0.72
ERCC6-206ENST00000475116 PRO3102Q9H379 93 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 Q9Y3F1 56 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 DNAH12Q6ZR08 3092 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 ELP1O95163 1332 aa10.55□□□□□ -0.72
ERCC6-206ENST00000475116 TRIM43BA6NCK2 446 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 DCDC2CA8MYV0 355 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 ZBTB43O43298 467 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 ARIH2O95376 493 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 NKX3-2P78367 333 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 TTLL4Q14679 1199 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 RTN1Q16799 776 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 Q6ZUG5 572 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 TRIM43Q96BQ3 446 aaPredicted RBP10.54□□□□□ -0.72
ERCC6-206ENST00000475116 PDLIM7Q9NR12 457 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 MAP3K20Q9NYL2 800 aaKnown RBP10.54□□□□□ -0.72
ERCC6-206ENST00000475116 LCTP09848 1927 aa10.54□□□□□ -0.72
ERCC6-206ENST00000475116 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
ERCC6-206ENST00000475116 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 GOLGA8BA8MQT2 603 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 ARVCFO00192 962 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 NKRFO15226 690 aaKnown RBP eCLIP10.53□□□□□ -0.72
ERCC6-206ENST00000475116 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
ERCC6-206ENST00000475116 MYL3P08590 195 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 CLTBP09497 229 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
ERCC6-206ENST00000475116 PSMA5P28066 241 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 PSMC6P62333 389 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 GHRHRQ02643 423 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 APOBRQ0VD83 1088 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 PGM5Q15124 567 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 USP17L6PQ6QN14 398 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 IL31RAQ8NI17 732 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 BADQ92934 168 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 BRF1Q92994 677 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 CUL5Q93034 780 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 PDCD2LQ9BRP1 358 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 USP26Q9BXU7 913 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 TMEM39AQ9NV64 488 aa10.53□□□□□ -0.72
ERCC6-206ENST00000475116 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
ERCC6-206ENST00000475116 SORBS3O60504 671 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CABYRO75952 493 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 RPS6KB1P23443 525 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CDC27P30260 824 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 BMP8BP34820 402 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CPT1AP50416 773 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CDK7P50613 346 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 FXR1P51114 621 aaKnown RBP eCLIP10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CHMP4BP1P59074 171 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 FAAP100Q0VG06 881 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 ITGA7Q13683 1181 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 BRDTQ58F21 947 aaPredicted RBP10.52□□□□□ -0.73
ERCC6-206ENST00000475116 CCDC62Q6P9F0 684 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.73
ERCC6-206ENST00000475116 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms