RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 USP17L17D6RBQ6 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L19D6RCP7 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L20D6RJB6 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 IRF6O14896 467 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ICAM1P05362 532 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ME1P48163 572 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP11P51784 963 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CEBPZQ03701 1054 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 FAM160A1Q05DH4 1040 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 USP17L24Q0WX57 530 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 PPIL2Q13356 520 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ZSCAN23Q3MJ62 389 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CCDC183Q5T5S1 534 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 RESP18Q5W5W9 173 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CAVIN1Q6NZI2 390 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 SHC4Q6S5L8 630 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 LBX2Q6XYB7 198 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ARMC9Q7Z3E5 817 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 NEK8Q86SG6 692 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 KRI1Q8N9T8 703 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 RASGRP4Q8TDF6 673 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CLEC4DQ8WXI8 215 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 MRPS27Q92552 414 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 SYAP1Q96A49 352 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 TIGD1Q96MW7 591 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 MTMR9Q96QG7 549 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 P2RX7Q99572 595 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 FEZ1Q99689 392 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 RPAP3Q9H6T3 665 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 RABGEF1Q9UJ41 708 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 MRPL11Q9Y3B7 192 aaKnown RBP7.54□□□□□ -1.2
ATG4A-207ENST00000474825 CSADQ9Y600 493 aa7.54□□□□□ -1.2
ATG4A-207ENST00000474825 ABCB11O95342 1321 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 GOLGA6L4A6NEF3 574 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 VWA5AO00534 786 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 NR1I2O75469 434 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 CYP3A4P08684 503 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 GCFC2P16383 781 aaKnown RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 MARCKSP29966 332 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 CIITAP33076 1130 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 SREBF1P36956 1147 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 HSD17B4P51659 736 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 HMGCS2P54868 508 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 PTGDRQ13258 359 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 DGKZQ13574 1117 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 COG2Q14746 738 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 IL17AQ16552 155 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 INF2Q27J81 1249 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 TRAF7Q6Q0C0 670 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 CCAR1Q8IX12 1150 aaKnown RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 TBCKQ8TEA7 893 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 FUCA2Q9BTY2 467 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 CLSTN2Q9H4D0 955 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 HOXC10Q9NYD6 342 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 DACT1Q9NYF0 836 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 TMOD4Q9NZQ9 345 aa7.53□□□□□ -1.2
ATG4A-207ENST00000474825 BIN2Q9UBW5 565 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 ZNF214Q9UL59 606 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-207ENST00000474825 FRMPD4Q14CM0 1322 aa7.52□□□□□ -1.2
ATG4A-207ENST00000474825 RLFQ13129 1914 aa7.52□□□□□ -1.2
ATG4A-207ENST00000474825 CTAGE5O15320 804 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 RAD21O60216 631 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 ZBED4O75132 1171 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 FLOT1O75955 427 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 LONP1P36776 959 aaKnown RBP7.52□□□□□ -1.21
ATG4A-207ENST00000474825 NDUFA8P51970 172 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 SNAP25P60880 206 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 KCNC4Q03721 635 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 GRIN1Q05586 938 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 IKQ13123 557 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-207ENST00000474825 ZNF174Q15697 407 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 UBE2SQ16763 222 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 JAKMIP3Q5VZ66 844 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 MAP1SQ66K74 1059 aaPredicted RBP7.52□□□□□ -1.21
ATG4A-207ENST00000474825 USP17L6PQ6QN14 398 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 MOB2Q70IA6 237 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 FSIP1Q8NA03 581 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 CLMNQ96JQ2 1002 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 ANO3Q9BYT9 981 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 TMEM60Q9H2L4 133 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 TMEM260Q9NX78 707 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 SLC45A1Q9Y2W3 748 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 RPTORQ8N122 1335 aa7.52□□□□□ -1.21
ATG4A-207ENST00000474825 A0A1B0GVL5 298 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 TMEM88BA6NKF7 163 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 SPDYE16A6NNV3 312 aaPredicted RBP7.51□□□□□ -1.21
ATG4A-207ENST00000474825 PPP1R3GB7ZBB8 358 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 GCOM1H8Y6P7 765 aaPredicted RBP7.51□□□□□ -1.21
ATG4A-207ENST00000474825 TRAF5O00463 557 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms