RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 B4DLN1 442 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 GCOM1H8Y6P7 765 aaPredicted RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 ZBTB43O43298 467 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 POLR2MP0CAP2 368 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 CASTP20810 708 aaKnown RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 HSD17B4P51659 736 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 MRPL12P52815 198 aaKnown RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 APOBRQ0VD83 1088 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 SEPT14Q6ZU15 432 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 COPS5Q92905 334 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 PXMP2Q9NR77 195 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 LRRC37A2A6NM11 1700 aa18.51■□□□□ 0.55
ITGB1-210ENST00000474568 BAZ2BQ9UIF8 2168 aaKnown RBP18.51■□□□□ 0.55
ITGB1-210ENST00000474568 CEP290O15078 2479 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 MOXD2PA6NHM9 499 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 MYCLP12524 364 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 RPS6KB1P23443 525 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 CST5P28325 142 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 TRAF1Q13077 416 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 FSCN1Q16658 493 aaKnown RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 RTN1Q16799 776 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 DUSP28Q4G0W2 176 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 HABP4Q5JVS0 413 aaKnown RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 PCSK9Q8NBP7 692 aaKnown RBP18.5■□□□□ 0.55
ITGB1-210ENST00000474568 OR6J1Q8NGC5 347 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 BRF1Q92994 677 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
ITGB1-210ENST00000474568 RBM47A0AV96 593 aaKnown RBP18.49■□□□□ 0.55
ITGB1-210ENST00000474568 ARIH2O95376 493 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 MAGEA10P43363 369 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-210ENST00000474568 MDM2Q00987 491 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-210ENST00000474568 TLE2Q04725 743 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 PPP2R5BQ15173 497 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 STXBP2Q15833 593 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 GLT1D1Q96MS3 346 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 MAF1Q9H063 256 aa18.49■□□□□ 0.55
ITGB1-210ENST00000474568 NR3C2P08235 984 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 TXNP10599 105 aaKnown RBP18.48■□□□□ 0.55
ITGB1-210ENST00000474568 PSMA5P28066 241 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 CDC27P30260 824 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 GHRHRQ02643 423 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 SNX17Q15036 470 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 IL31RAQ8NI17 732 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 SCFD2Q8WU76 684 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.552e-6■■■■□ 21.7
ITGB1-210ENST00000474568 IWS1Q96ST2 819 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 RBM28Q9NW13 759 aaKnown RBP18.48■□□□□ 0.55
ITGB1-210ENST00000474568 PRKAG2Q9UGJ0 569 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 CNTNAP5Q8WYK1 1306 aa18.48■□□□□ 0.55
ITGB1-210ENST00000474568 MYL3P08590 195 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 TTLL4Q14679 1199 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 LY6KQ17RY6 165 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 HEATR3Q7Z4Q2 680 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 SH3RF1Q7Z6J0 888 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 PDLIM7Q9NR12 457 aa18.47■□□□□ 0.55
ITGB1-210ENST00000474568 ZEB2O60315 1214 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 SORBS3O60504 671 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 METAP2P50579 478 aaKnown RBP eCLIP18.46■□□□□ 0.55
ITGB1-210ENST00000474568 PSMC6P62333 389 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 NKX3-2P78367 333 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 PGM5Q15124 567 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 SMARCC2Q8TAQ2 1214 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 CUL5Q93034 780 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 GDF15Q99988 308 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
ITGB1-210ENST00000474568 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-210ENST00000474568 MAP3K20Q9NYL2 800 aaKnown RBP18.46■□□□□ 0.55
ITGB1-210ENST00000474568 Q9Y3F1 56 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 MYH6P13533 1939 aa18.46■□□□□ 0.55
ITGB1-210ENST00000474568 A0A0U1RQG5 324 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 TRIM43BA6NCK2 446 aa18.45■□□□□ 0.54
ITGB1-210ENST00000474568 EIF3JO75822 258 aaKnown RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 ADD1P35611 737 aaKnown RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 UBE2SQ16763 222 aa18.45■□□□□ 0.54
ITGB1-210ENST00000474568 C1orf53Q5VUE5 145 aa18.45■□□□□ 0.54
ITGB1-210ENST00000474568 TRIM43Q96BQ3 446 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 PRO3102Q9H379 93 aa18.45■□□□□ 0.54
ITGB1-210ENST00000474568 V9GY48 417 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-210ENST00000474568 ELP1O95163 1332 aa18.45■□□□□ 0.54
ITGB1-210ENST00000474568 NKRFO15226 690 aaKnown RBP eCLIP18.44■□□□□ 0.54
ITGB1-210ENST00000474568 EPB41L2O43491 1005 aaKnown RBP18.44■□□□□ 0.54
ITGB1-210ENST00000474568 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 CLTBP09497 229 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 CCND2P30279 289 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 FUT2Q10981 343 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 CCDC62Q6P9F0 684 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 RUFY3Q7L099 469 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 SAMD3Q8N6K7 520 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 PPP1R13LQ8WUF5 828 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms