RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 CCDC174Q6PII3 467 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 FAM184AQ8NB25 1140 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 ALG1Q9BT22 464 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 RANBP17Q9H2T7 1088 aaKnown RBP8.75□□□□□ -1.01
CCDC93-207ENST00000474006 SLC38A10Q9HBR0 1119 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 CWC22Q9HCG8 908 aaKnown RBP8.75□□□□□ -1.01
CCDC93-207ENST00000474006 RBPJLQ9UBG7 517 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 SEC63Q9UGP8 760 aaKnown RBP8.75□□□□□ -1.01
CCDC93-207ENST00000474006 CTDP1Q9Y5B0 961 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-207ENST00000474006 CNTNAP5Q8WYK1 1306 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 WDR33Q9C0J8 1336 aaKnown RBP8.75□□□□□ -1.01
CCDC93-207ENST00000474006 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
CCDC93-207ENST00000474006 IGF2BP3O00425 579 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC93-207ENST00000474006 PEX10O60683 326 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 PPP1R11O60927 126 aaPredicted RBP8.74□□□□□ -1.01
CCDC93-207ENST00000474006 SCG2P13521 617 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 HSPA6P17066 643 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 HERVK_113P62684 666 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 TMEM132BQ14DG7 1078 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 OTUD7BQ6GQQ9 843 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 LBX2Q6XYB7 198 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 FBXO11Q86XK2 927 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 CPXCR1Q8N123 301 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 REPS2Q8NFH8 660 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 ADAMTS19Q8TE59 1207 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 WASF1Q92558 559 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 COA7Q96BR5 231 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 AMNQ9BXJ7 453 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 RAVER2Q9HCJ3 691 aaKnown RBP8.74□□□□□ -1.01
CCDC93-207ENST00000474006 GJB4Q9NTQ9 266 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 BTBD7Q9P203 1132 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 PCDHA1Q9Y5I3 950 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 MYPNQ86TC9 1320 aa8.74□□□□□ -1.01
CCDC93-207ENST00000474006 STXBP3O00186 592 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 CNMDO75829 334 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
CCDC93-207ENST00000474006 ICAM1P05362 532 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 SYT1P21579 422 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 MAP2K2P36507 400 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 STAT3P40763 770 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 VAC14Q08AM6 782 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 PLS1Q14651 629 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 WWC2Q6AWC2 1192 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 MB21D1Q8N884 522 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 FBXO18Q8NFZ0 1043 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 GPKOWQ92917 476 aaPredicted RBP eCLIP8.73□□□□□ -1.01
CCDC93-207ENST00000474006 ALG2Q9H553 416 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 ZCCHC17Q9NP64 241 aaKnown RBP8.73□□□□□ -1.01
CCDC93-207ENST00000474006 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 VPS54Q9P1Q0 977 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 KCNJ14Q9UNX9 436 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 RABGAP1Q9Y3P9 1069 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 KIF3AQ9Y496 699 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 ZNF536O15090 1300 aa8.73□□□□□ -1.01
CCDC93-207ENST00000474006 GREB1LQ9C091 1923 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 SMCO2A6NFE2 343 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 ATP2A1O14983 1001 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 TAL1P17542 331 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 XBP1P17861 261 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 PDCP20941 246 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 GCLCP48506 637 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 MMP16P51512 607 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 OAZ1P54368 228 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 NAPAP54920 295 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 NLRP5P59047 1200 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 GUCY1B3Q02153 619 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 TRAF1Q13077 416 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 TRIM29Q14134 588 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 USH1GQ495M9 461 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 KRT40Q6A162 431 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 GPRC5AQ8NFJ5 357 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 SMCR8Q8TEV9 937 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 GTF3C2Q8WUA4 911 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 C8orf76Q96K31 380 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 PARK7Q99497 189 aaKnown RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 SPSB2Q99619 263 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 PAGR1Q9BTK6 254 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 ZFYVE28Q9HCC9 887 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 SH3GLB2Q9NR46 395 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 ZNF214Q9UL59 606 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 CCPG1Q9ULG6 757 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 MRPL11Q9Y3B7 192 aaKnown RBP8.72□□□□□ -1.01
CCDC93-207ENST00000474006 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
CCDC93-207ENST00000474006 H3BQV1 296 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 hCG_1984214I3L0E3 225 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 CA12O43570 354 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 STX6O43752 255 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 ALAS1P13196 640 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.02
CCDC93-207ENST00000474006 DDIT3P35638 169 aa8.71□□□□□ -1.02
CCDC93-207ENST00000474006 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-207ENST00000474006 IFFO2Q5TF58 517 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms