RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ROBO2Q9HCK4 1378 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 ZC3H12DA2A288 527 aaKnown RBP3.29□□□□□ -1.88
CALD1-216ENST00000473714 ANKRD62A6NC57 917 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 GLTPD2A6NH11 291 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 MINDY4BA8MYZ0 360 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PRR33A8MZF0 331 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 U2SURPO15042 1029 aaKnown RBP3.29□□□□□ -1.88
CALD1-216ENST00000473714 GBP2P32456 591 aaPredicted RBP3.29□□□□□ -1.88
CALD1-216ENST00000473714 NTF4P34130 210 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 TRHRP34981 398 aaPredicted RBP3.29□□□□□ -1.88
CALD1-216ENST00000473714 PDE6BP35913 854 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 FCGRTP55899 365 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 ZXDAP98168 799 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PPP2R3AQ06190 1150 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PWP1Q13610 501 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 MAP3K11Q16584 847 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 LDLRAD1Q5T700 205 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 MEI1Q5TIA1 1274 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 MPRIPQ6WCQ1 1025 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 DTHD1Q6ZMT9 781 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PDZD3Q86UT5 571 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 CKAP2LQ8IYA6 745 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 SPON2Q9BUD6 331 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 BDH2Q9BUT1 245 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 TRIM55Q9BYV6 548 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 OSBPL7Q9BZF2 842 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 LNPKQ9C0E8 428 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 ADAMTS10Q9H324 1103 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 ZNF552Q9H707 407 aaPredicted RBP3.29□□□□□ -1.88
CALD1-216ENST00000473714 GCM1Q9NP62 436 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 PRDM11Q9NQV5 511 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 TFCP2L1Q9NZI6 479 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 IRAK3Q9Y616 596 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 KNDC1Q76NI1 1749 aa3.29□□□□□ -1.88
CALD1-216ENST00000473714 SPATA31E1Q6ZUB1 1445 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 SSH2Q76I76 1423 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 N4BP2Q86UW6 1770 aaPredicted RBP3.28□□□□□ -1.88
CALD1-216ENST00000473714 PRR36Q9H6K5 1346 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 ALS2Q96Q42 1657 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 CTSHP09668 335 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 RLBP1P12271 317 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 PI3P19957 117 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 ST13P50502 369 aaKnown RBP3.28□□□□□ -1.88
CALD1-216ENST00000473714 EVA1CP58658 441 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 PAK2Q13177 524 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 CHRNA2Q15822 529 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 DDB1Q16531 1140 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 CCDC144BQ3MJ40 725 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 PPM1JQ5JR12 505 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 PRPF40BQ6NWY9 871 aaKnown RBP3.28□□□□□ -1.88
CALD1-216ENST00000473714 C22orf34Q6ZV56 151 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 TMPRSS7Q7RTY8 843 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 LILRA2Q8N149 483 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 OXR1Q8N573 874 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 KCT2Q8NC54 265 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 PANK1Q8TE04 598 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 DACT3Q96B18 629 aaPredicted RBP3.28□□□□□ -1.88
CALD1-216ENST00000473714 ARMC5Q96C12 935 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 GPRASP2Q96D09 838 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 MRFAP1L1Q96HT8 127 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 SIGLEC10Q96LC7 697 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 CWC22Q9HCG8 908 aaKnown RBP3.28□□□□□ -1.88
CALD1-216ENST00000473714 RNF181Q9P0P0 153 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 ST14Q9Y5Y6 855 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 THSD7BQ9C0I4 1608 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 BTAF1O14981 1849 aa3.28□□□□□ -1.88
CALD1-216ENST00000473714 LTBP1Q14766 1721 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 TRPM3Q9HCF6 1732 aaPredicted RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 KIAA1551Q9HCM1 1747 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 USP31Q70CQ4 1352 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 KIAA0232Q92628 1395 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 PIK3C2AO00443 1686 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 QRICH2Q9H0J4 1663 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 BRCA1P38398 1863 aaKnown RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 CCDC88AQ3V6T2 1871 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 TMEM238LA0A1B0GVL6 79 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 SLC22A31A6NKX4 558 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 F6X3S4 739 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 MAP2K2P36507 400 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 RACK1P63244 317 aaKnown RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 GRM2Q14416 872 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 BMS1Q14692 1282 aaKnown RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 HHIPL2Q6UWX4 724 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 FRMD5Q7Z6J6 570 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 COL23A1Q86Y22 540 aaPredicted RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 KIAA0825Q8IV33 1275 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 PDZD8Q8NEN9 1154 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 ACSBG1Q96GR2 724 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 INTS4Q96HW7 963 aaKnown RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 ADAM7Q9H2U9 754 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 KBTBD4Q9NVX7 518 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 GPN3Q9UHW5 284 aaPredicted RBP3.27□□□□□ -1.89
CALD1-216ENST00000473714 CSADQ9Y600 493 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 CAPN6Q9Y6Q1 641 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 WNK3Q9BYP7 1800 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 TRIOBPQ9H2D6 2365 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 LAMB4A4D0S4 1761 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 NHSQ6T4R5 1651 aa3.27□□□□□ -1.89
CALD1-216ENST00000473714 KANK1Q14678 1352 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 ARFGEF1Q9Y6D6 1849 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms