RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RBM47A0AV96 593 aaKnown RBP20.96■□□□□ 0.95
SNX4-204ENST00000473417 DYNC1LI2O43237 492 aaPredicted RBP20.96■□□□□ 0.95
SNX4-204ENST00000473417 DHX16O60231 1041 aaKnown RBP20.96■□□□□ 0.95
SNX4-204ENST00000473417 DUSP28Q4G0W2 176 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 CXCL17Q6UXB2 119 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 FAM126BQ8IXS8 530 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 SLC17A8Q8NDX2 589 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 VTI1AQ96AJ9 217 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 ABCB11O95342 1321 aa20.96■□□□□ 0.95
SNX4-204ENST00000473417 PALM3A6NDB9 673 aaPredicted RBP20.95■□□□□ 0.94
SNX4-204ENST00000473417 KLRF2D3W0D1 207 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 CABYRO75952 493 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
SNX4-204ENST00000473417 PSMA5P28066 241 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 EPHB4P54760 987 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 FPGSQ05932 587 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 FAM109BQ6ICB4 259 aaPredicted RBP20.95■□□□□ 0.94
SNX4-204ENST00000473417 RAB11FIP4Q86YS3 637 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 SLC43A3Q8NBI5 491 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 MAF1Q9H063 256 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 STXBP5LQ9Y2K9 1186 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 SLC12A7Q9Y666 1083 aa20.95■□□□□ 0.94
SNX4-204ENST00000473417 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
SNX4-204ENST00000473417 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
SNX4-204ENST00000473417 DDAH1O94760 285 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 TIMP1P01033 207 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 RXRAP19793 462 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 FGD1P98174 961 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 QRICH1Q2TAL8 776 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 C8orf34Q49A92 452 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 MPHOSPH6Q99547 160 aaKnown RBP20.94■□□□□ 0.94
SNX4-204ENST00000473417 WDR11Q9BZH6 1224 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 GBF1Q92538 1859 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 MYH7BA7E2Y1 1941 aa20.94■□□□□ 0.94
SNX4-204ENST00000473417 A0A0C4DFX4 3053 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 TANC1Q9C0D5 1861 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 ZEB2O60315 1214 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 CD4P01730 458 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 RPS6KB1P23443 525 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 PDE4DQ08499 809 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 Q6ZUG5 572 aa20.93■□□□□ 0.94
SNX4-204ENST00000473417 CTCFLQ8NI51 663 aaPredicted RBP20.93■□□□□ 0.94
SNX4-204ENST00000473417 TLR3O15455 904 aaKnown RBP20.92■□□□□ 0.94
SNX4-204ENST00000473417 MFSD5Q6N075 450 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 SYNE3Q6ZMZ3 975 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 SGMS1Q86VZ5 419 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 GRIN2DO15399 1336 aa20.92■□□□□ 0.94
SNX4-204ENST00000473417 CDH23Q9H251 3354 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 CALM1P0DP23 149 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 CALM2P0DP24 149 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 CALM3P0DP25 149 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 KIF5BP33176 963 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 ITGA7Q13683 1181 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 SLC35G1Q2M3R5 365 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 MICU3Q86XE3 530 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 SCFD2Q8WU76 684 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 TBC1D5Q92609 795 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 MAP3K14Q99558 947 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 ZSWIM6Q9HCJ5 1215 aa20.91■□□□□ 0.94
SNX4-204ENST00000473417 KLF18A0A0U1RQI7 1052 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 B4DLN1 442 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 NKRFO15226 690 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX4-204ENST00000473417 CPT1AP50416 773 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 MRPL12P52815 198 aaKnown RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 SMAD3P84022 425 aaKnown RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 APOA5Q6Q788 366 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 RUFY3Q7L099 469 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 MCF2L2Q86YR7 1114 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 SYTL5Q8TDW5 730 aaPredicted RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 BRF1Q92994 677 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 MTMR8Q96EF0 704 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 UPF3BQ9BZI7 483 aaKnown RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 COL20A1Q9P218 1284 aa20.9■□□□□ 0.94
SNX4-204ENST00000473417 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 MRPL11Q9Y3B7 192 aaKnown RBP20.9■□□□□ 0.94
SNX4-204ENST00000473417 CYTH3O43739 400 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 PSMC6P62333 389 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 APOBRQ0VD83 1088 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 HOMER1Q86YM7 354 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 FANCBQ8NB91 859 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 TM6SF1Q9BZW5 370 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 RIOX1Q9H6W3 641 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 CYP46A1Q9Y6A2 500 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 EYSQ5T1H1 3165 aa20.89■□□□□ 0.93
SNX4-204ENST00000473417 SCN5AQ14524 2016 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 OPLAHO14841 1288 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 ZBTB43O43298 467 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 PLEKHA8P1O95397 391 aa20.88■□□□□ 0.93
SNX4-204ENST00000473417 PURAQ00577 322 aaKnown RBP20.88■□□□□ 0.93
SNX4-204ENST00000473417 GHRHRQ02643 423 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms