RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SMCHD1A6NHR9 2005 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 ZNF536O15090 1300 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 ACTN4O43707 911 aaKnown RBP16.5■□□□□ 0.23
HIF3A-206ENST00000472815 SLC37A4O43826 429 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 ALAS1P13196 640 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-206ENST00000472815 STAT6P42226 847 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 TECP42680 631 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 TXKP42681 527 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
HIF3A-206ENST00000472815 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 CALML4Q96GE6 196 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 MBOAT7Q96N66 472 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 ELP3Q9H9T3 547 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 DISC1Q9NRI5 854 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 STK24Q9Y6E0 443 aa16.5■□□□□ 0.23
HIF3A-206ENST00000472815 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 CIITAP33076 1130 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 ZNF165P49910 485 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 HSD17B4P51659 736 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 GHRHRQ02643 423 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 PPIL2Q13356 520 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 DGKZQ13574 1117 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 TKFCQ3LXA3 575 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 Q4G0T1 1027 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 RRAGBQ5VZM2 374 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 CRYGNQ8WXF5 182 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 RAVER2Q9HCJ3 691 aaKnown RBP16.49■□□□□ 0.23
HIF3A-206ENST00000472815 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 TUBE1Q9UJT0 475 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
HIF3A-206ENST00000472815 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-206ENST00000472815 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 SLC26A4O43511 780 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 TOMM70O94826 608 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 MYL1P05976 194 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 NLRP12P59046 1061 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
HIF3A-206ENST00000472815 PNOCQ13519 176 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 CABP7Q86V35 215 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 TRIML1Q8N9V2 468 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 CDK5RAP3Q96JB5 506 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-206ENST00000472815 ADAMTS5Q9UNA0 930 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 RLFQ13129 1914 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 FKBP1BP68106 108 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 FAM20AQ96MK3 541 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 DNAJC25Q9H1X3 360 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
HIF3A-206ENST00000472815 DACH1Q9UI36 760 aa16.48■□□□□ 0.23
HIF3A-206ENST00000472815 A0A0G2JLL6 359 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-206ENST00000472815 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-206ENST00000472815 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-206ENST00000472815 E2F4Q16254 413 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 PRR16Q569H4 304 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 NT5DC1Q5TFE4 455 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
HIF3A-206ENST00000472815 PRRT2Q7Z6L0 340 aaPredicted RBP16.47■□□□□ 0.23
HIF3A-206ENST00000472815 SMC1BQ8NDV3 1235 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 TEX13BQ9BXU2 312 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 KCNMB3Q9NPA1 279 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 KCNH4Q9UQ05 1017 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 KDM3AQ9Y4C1 1321 aa16.47■□□□□ 0.23
HIF3A-206ENST00000472815 A0A087X0B3 334 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-206ENST00000472815 BECN2A8MW95 431 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 IRF6O14896 467 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 EDIL3O43854 480 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 TAL1P17542 331 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-206ENST00000472815 HOXA7P31268 230 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-206ENST00000472815 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
HIF3A-206ENST00000472815 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
HIF3A-206ENST00000472815 GADL1Q6ZQY3 521 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
HIF3A-206ENST00000472815 TPM4P67936 248 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-206ENST00000472815 AMPD3Q01432 767 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 SEMA3FQ13275 785 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 CLEC4DQ8WXI8 215 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
HIF3A-206ENST00000472815 SLC10A4Q96EP9 437 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 GSDMAQ96QA5 445 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 BPIFA3Q9BQP9 254 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
HIF3A-206ENST00000472815 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms