RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PTPRN2Q92932 1015 aa8.4□□□□□ -1.06
CLK1-209ENST00000472679 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
CLK1-209ENST00000472679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLK1-209ENST00000472679 PPARGC1AQ9UBK2 798 aaKnown RBP8.4□□□□□ -1.06
CLK1-209ENST00000472679 CCDC163A0A0D9SF12 145 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 RAPGEF3O95398 923 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 ASMTLO95671 621 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 FPR2P25090 351 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 TKFCQ3LXA3 575 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 CEP68Q76N32 757 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 HOMER1Q86YM7 354 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 CLUHP3Q96NS8 147 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 TNFRSF12AQ9NP84 129 aa8.39□□□□□ -1.07
CLK1-209ENST00000472679 MYO1BO43795 1136 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 GPR85P60893 370 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 GABREP78334 506 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 LSAMPQ13449 338 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 BICRALQ6AI39 1079 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 LBX2Q6XYB7 198 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 APPBP2Q92624 585 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 CHAMP1Q96JM3 812 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 KCNK12Q9HB15 430 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLK1-209ENST00000472679 NDOR1Q9UHB4 597 aa8.38□□□□□ -1.07
CLK1-209ENST00000472679 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
CLK1-209ENST00000472679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.37□□□□□ -1.07
CLK1-209ENST00000472679 C22orf46C9J442 243 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 PDE6BP35913 854 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 ARL4AP40617 200 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 SDE2Q6IQ49 451 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 MAMDC2Q7Z304 686 aaPredicted RBP8.37□□□□□ -1.07
CLK1-209ENST00000472679 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 USP33Q8TEY7 942 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 ZFYVE21Q9BQ24 234 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 RXFP1Q9HBX9 757 aa8.37□□□□□ -1.07
CLK1-209ENST00000472679 A0A1W2PQJ5 194 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 ENPP3O14638 875 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 PLD2O14939 933 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
CLK1-209ENST00000472679 CDC45O75419 566 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 GLI4P10075 376 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 TRIM61Q5EBN2 209 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 MPZL3Q6UWV2 235 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 PRR23BQ6ZRT6 265 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 C16orf86Q6ZW13 317 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 Q8N1Y9 231 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 GSTCDQ8NEC7 633 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.36□□□□□ -1.073e-7■■■□□ 17.3
CLK1-209ENST00000472679 TMEM169Q96HH4 297 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 SCLYQ96I15 445 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 MRPL4Q9BYD3 311 aaKnown RBP8.36□□□□□ -1.07
CLK1-209ENST00000472679 CLDND1Q9NY35 253 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 PCDHA9Q9Y5H5 950 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 PCDHA8Q9Y5H6 950 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 CD2APQ9Y5K6 639 aa8.36□□□□□ -1.07
CLK1-209ENST00000472679 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 NTRK1P04629 796 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 DBHP09172 617 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 GTF2A2P52657 109 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 FGD2Q7Z6J4 655 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 TRMT2BQ96GJ1 504 aaKnown RBP8.35□□□□□ -1.07
CLK1-209ENST00000472679 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 TRIM39Q9HCM9 518 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 SFMBT1Q9UHJ3 866 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
CLK1-209ENST00000472679 OR14I1A6ND48 311 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 AQP7O14520 342 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 KCNQ2O43526 872 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 CRTAMO95727 393 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 GUCY1A3Q02108 690 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 BRAPQ7Z569 592 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 DIRC2Q96SL1 478 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 KLHL14Q9P2G3 628 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 SIT1Q9Y3P8 196 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 X6R8D5 127 aa8.34□□□□□ -1.07
CLK1-209ENST00000472679 ZC3H12DA2A288 527 aaKnown RBP8.33□□□□□ -1.08
CLK1-209ENST00000472679 H7BY64 318 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 RASGRP1O95267 797 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 MPOP05164 745 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 TCEA2Q15560 299 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 MLANAQ16655 118 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 WWC2Q6AWC2 1192 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 MTDHQ86UE4 582 aaKnown RBP8.33□□□□□ -1.08
CLK1-209ENST00000472679 NSUN3Q9H649 340 aaKnown RBP8.33□□□□□ -1.08
CLK1-209ENST00000472679 IPPKQ9H8X2 491 aa8.33□□□□□ -1.08
CLK1-209ENST00000472679 SRGAP3O43295 1099 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 EFCAB14O75071 495 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 SOD2P04179 222 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 CYBBP04839 570 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 PABPC4Q13310 644 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLK1-209ENST00000472679 KIZQ2M2Z5 673 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms