RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 NSUN6Q8TEA1 469 aaKnown RBP21.57■■□□□ 1.04
PKD1-209ENST00000472659 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
PKD1-209ENST00000472659 WDR11Q9BZH6 1224 aa21.57■■□□□ 1.04
PKD1-209ENST00000472659 MAP3K20Q9NYL2 800 aaKnown RBP21.57■■□□□ 1.04
PKD1-209ENST00000472659 SLC12A7Q9Y666 1083 aa21.57■■□□□ 1.04
PKD1-209ENST00000472659 B4DLN1 442 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 DYNC1LI2O43237 492 aaPredicted RBP21.56■■□□□ 1.04
PKD1-209ENST00000472659 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
PKD1-209ENST00000472659 LRIT3Q3SXY7 679 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 ANKRD33Q7Z3H0 272 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 SRBD1Q8N5C6 995 aaKnown RBP21.56■■□□□ 1.04
PKD1-209ENST00000472659 TCEANC2Q96MN5 208 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 GLT1D1Q96MS3 346 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 IWS1Q96ST2 819 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 LZTS2Q9BRK4 669 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 AP5M1Q9H0R1 490 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 PXMP2Q9NR77 195 aa21.56■■□□□ 1.04
PKD1-209ENST00000472659 LAMA2P24043 3122 aaKnown RBP21.55■■□□□ 1.04
PKD1-209ENST00000472659 GNAQP50148 359 aa21.55■■□□□ 1.04
PKD1-209ENST00000472659 APOA5Q6Q788 366 aa21.55■■□□□ 1.04
PKD1-209ENST00000472659 RAB11FIP4Q86YS3 637 aa21.55■■□□□ 1.04
PKD1-209ENST00000472659 SCFD2Q8WU76 684 aa21.55■■□□□ 1.04
PKD1-209ENST00000472659 TRIM43BA6NCK2 446 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 REC8O95072 547 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 HOXA13P31271 388 aaPredicted RBP21.54■■□□□ 1.04
PKD1-209ENST00000472659 CDK7P50613 346 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 PPP2R5BQ15173 497 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 SH3RF1Q7Z6J0 888 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 MICU3Q86XE3 530 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 TRIM43Q96BQ3 446 aaPredicted RBP21.54■■□□□ 1.04
PKD1-209ENST00000472659 RRP36Q96EU6 259 aaKnown RBP21.54■■□□□ 1.04
PKD1-209ENST00000472659 TOX2Q96NM4 488 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 SNX14Q9Y5W7 946 aa21.54■■□□□ 1.04
PKD1-209ENST00000472659 KIAA1217Q5T5P2 1943 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 PQBP1O60828 265 aaKnown RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 ARIH2O95376 493 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 HMGB1P09429 215 aaKnown RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 CLTBP09497 229 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 MDM2Q00987 491 aaPredicted RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 ARHGEF16Q5VV41 709 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 CCDC62Q6P9F0 684 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 CXCL17Q6UXB2 119 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 FANCBQ8NB91 859 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 PIBF1Q8WXW3 757 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 PRDM5Q9NQX1 630 aaPredicted RBP21.53■■□□□ 1.04
PKD1-209ENST00000472659 PRKAG2Q9UGJ0 569 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 BRPF3Q9ULD4 1205 aa21.53■■□□□ 1.04
PKD1-209ENST00000472659 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
PKD1-209ENST00000472659 SOX1O00570 391 aaPredicted RBP21.52■■□□□ 1.04
PKD1-209ENST00000472659 NKRFO15226 690 aaKnown RBP eCLIP21.52■■□□□ 1.04
PKD1-209ENST00000472659 FAAP100Q0VG06 881 aa21.52■■□□□ 1.04
PKD1-209ENST00000472659 STXBP2Q15833 593 aa21.52■■□□□ 1.04
PKD1-209ENST00000472659 SLC43A3Q8NBI5 491 aa21.52■■□□□ 1.04
PKD1-209ENST00000472659 PDCD2LQ9BRP1 358 aa21.52■■□□□ 1.04
PKD1-209ENST00000472659 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.03
PKD1-209ENST00000472659 GCOM1H8Y6P7 765 aaPredicted RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 ARVCFO00192 962 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 KIAA0355O15063 1070 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 EPB41L2O43491 1005 aaKnown RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 CABYRO75952 493 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 NR3C2P08235 984 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 POLR2MP0CAP2 368 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 TXNP10599 105 aaKnown RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 CPA1P15085 419 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 TTLL4Q14679 1199 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 TDHQ8IZJ6 230 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 OR6J1Q8NGC5 347 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 COPS5Q92905 334 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 JAKMIP1Q96N16 626 aaKnown RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 UBE2OQ9C0C9 1292 aaKnown RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 SEC63Q9UGP8 760 aaKnown RBP21.51■■□□□ 1.03
PKD1-209ENST00000472659 GRIN2DO15399 1336 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 MROH7Q68CQ1 1323 aa21.51■■□□□ 1.03
PKD1-209ENST00000472659 ZEB2O60315 1214 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
PKD1-209ENST00000472659 ITGB8P26012 769 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 FUT2Q10981 343 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 FAM126BQ8IXS8 530 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 IL31RAQ8NI17 732 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 LBHD1Q9BQE6 289 aaPredicted RBP21.5■■□□□ 1.03
PKD1-209ENST00000472659 TBX21Q9UL17 535 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 CNTNAP5Q8WYK1 1306 aa21.5■■□□□ 1.03
PKD1-209ENST00000472659 ZBTB43O43298 467 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 CPT1AP50416 773 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 RCAN1P53805 252 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 PURAQ00577 322 aaKnown RBP21.49■■□□□ 1.03
PKD1-209ENST00000472659 PGM5Q15124 567 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 SYNE3Q6ZMZ3 975 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 SEPT14Q6ZU15 432 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 FBXL16Q8N461 479 aa21.49■■□□□ 1.03
PKD1-209ENST00000472659 RBM28Q9NW13 759 aaKnown RBP21.49■■□□□ 1.03
PKD1-209ENST00000472659 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
PKD1-209ENST00000472659 A6NJR5 290 aa21.48■■□□□ 1.03
PKD1-209ENST00000472659 DCDC2CA8MYV0 355 aa21.48■■□□□ 1.03
PKD1-209ENST00000472659 PIK3CDO00329 1044 aa21.48■■□□□ 1.03
PKD1-209ENST00000472659 RGS20O76081 388 aa21.48■■□□□ 1.03
PKD1-209ENST00000472659 VSIG10LQ86VR7 867 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms