RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TMEM87BQ96K49 555 aa16.66■□□□□ 0.26
ABCF3-209ENST00000472608 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
ABCF3-209ENST00000472608 WNT8AQ9H1J5 351 aa16.66■□□□□ 0.26
ABCF3-209ENST00000472608 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
ABCF3-209ENST00000472608 GRIN2DO15399 1336 aa16.66■□□□□ 0.26
ABCF3-209ENST00000472608 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
ABCF3-209ENST00000472608 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
ABCF3-209ENST00000472608 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
ABCF3-209ENST00000472608 ANTXR2P58335 489 aa16.65■□□□□ 0.26
ABCF3-209ENST00000472608 GPATCH4Q5T3I0 446 aaKnown RBP16.65■□□□□ 0.26
ABCF3-209ENST00000472608 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
ABCF3-209ENST00000472608 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
ABCF3-209ENST00000472608 TMEM232C9JQI7 657 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 GTPBP6O43824 516 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-209ENST00000472608 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
ABCF3-209ENST00000472608 LIFRP42702 1097 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 CCL23P55773 120 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 WTAPQ15007 396 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
ABCF3-209ENST00000472608 SNRNP48Q6IEG0 339 aaKnown RBP16.64■□□□□ 0.25
ABCF3-209ENST00000472608 AGBL1Q96MI9 1066 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 ASTN1O14525 1302 aa16.64■□□□□ 0.25
ABCF3-209ENST00000472608 RFXAPO00287 272 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 PRC1O43663 620 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 ZBED4O75132 1171 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 PFKMP08237 780 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 OAZ1P54368 228 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
ABCF3-209ENST00000472608 ITGA7Q13683 1181 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 CXCL17Q6UXB2 119 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 KCTD1Q719H9 257 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 ARMCX2Q7L311 632 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
ABCF3-209ENST00000472608 ALYREFQ86V81 257 aaKnown RBP16.63■□□□□ 0.25
ABCF3-209ENST00000472608 HLA-CQ95604 372 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 GNEQ9Y223 722 aaKnown RBP16.63■□□□□ 0.25
ABCF3-209ENST00000472608 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
ABCF3-209ENST00000472608 LRRC37A2A6NM11 1700 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 EPOPA6NHQ4 379 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 B4GALT4O60513 344 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 CA3P07451 260 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 BEX3Q00994 111 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 ASPRV1Q53RT3 343 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 MAP3K14Q99558 947 aa16.62■□□□□ 0.25
ABCF3-209ENST00000472608 BRWD1Q9NSI6 2320 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 PSMA5P28066 241 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-209ENST00000472608 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 SGMS1Q86VZ5 419 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 TRPV6Q9H1D0 765 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 FBXO40Q9UH90 709 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
ABCF3-209ENST00000472608 MCM3APO60318 1980 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-209ENST00000472608 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-209ENST00000472608 ANAPC15P60006 121 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 TNFAIP2Q03169 654 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 TROAPQ12815 778 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 KRT40Q6A162 431 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 CHST13Q8NET6 341 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 PHOSPHO2Q8TCD6 241 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 TM6SF1Q9BZW5 370 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 CD320Q9NPF0 282 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 PNMA2Q9UL42 364 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
ABCF3-209ENST00000472608 CTDP1Q9Y5B0 961 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-209ENST00000472608 FAM86C2PA6NEL3 165 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 PRR33A8MZF0 331 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 PARP1P09874 1014 aaKnown RBP16.59■□□□□ 0.25
ABCF3-209ENST00000472608 TAP1Q03518 808 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-209ENST00000472608 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
ABCF3-209ENST00000472608 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 RASGRP2Q7LDG7 609 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 FAM133AQ8N9E0 248 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 SCLYQ96I15 445 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
ABCF3-209ENST00000472608 ISY1Q9ULR0 285 aaKnown RBP16.59■□□□□ 0.25
ABCF3-209ENST00000472608 Q9Y3F1 56 aa16.59■□□□□ 0.25
ABCF3-209ENST00000472608 PALM3A6NDB9 673 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-209ENST00000472608 LPXNO60711 386 aa16.58■□□□□ 0.24
ABCF3-209ENST00000472608 DDAH1O94760 285 aa16.58■□□□□ 0.24
ABCF3-209ENST00000472608 ARHGEF15O94989 841 aa16.58■□□□□ 0.24
ABCF3-209ENST00000472608 GRM4Q14833 912 aa16.58■□□□□ 0.24
ABCF3-209ENST00000472608 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms