RNA–Protein interactions for RNA: ENST00000472401.5

PDE9A-222, Transcript of phosphodiesterase 9A, human

TSL 3

Gene PDE9A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-222	ENST00000472401	SCN10A	Q9Y5Y9	1956 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	ASB14	A6NK59	587 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	LOC730098	B7Z3J9	87 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	LINC01565	O15544	149 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	ZBED4	O75132	1171 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	SELP	P16109	830 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	HTRA4	P83105	476 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	MTX1	Q13505	466 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	HDAC1	Q13547	482 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	TNNI3K	Q59H18	835 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	NFRKB	Q6P4R8	1299 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	KIAA1211	Q6ZU35	1233 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	LRRC8D	Q7L1W4	858 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	NKD2	Q969F2	451 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	KIFC2	Q96AC6	838 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	ANTXR1	Q9H6X2	564 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	SLC38A10	Q9HBR0	1119 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	A1CF	Q9NQ94	594 aa	Known RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	TLR7	Q9NYK1	1049 aa	Known RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	CD207	Q9UJ71	328 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	TNN	Q9UQP3	1299 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	FPGT-TNNI3K	V9GXZ4	949 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	ATRX	P46100	2492 aa		10.86	□□□□□ -0.67
PDE9A-222	ENST00000472401	CYP2D7	A0A087X1C5	515 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	MAGEB6P1	A0A0J9YX57	407 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	NDUFB10	O96000	172 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	PDE4A	P27815	886 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	PTGIS	Q16647	500 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	DUSP28	Q4G0W2	176 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	PRPF38A	Q8NAV1	312 aa	Known RBP	10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	CAGE1	Q8TC20	777 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	CCDC17	Q96LX7	622 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	SAMD11	Q96NU1	681 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	KANSL2	Q9H9L4	492 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	GPHN	Q9NQX3	736 aa	Predicted RBP	10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	HDAC5	Q9UQL6	1122 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	DNAH14	Q0VDD8	3507 aa		10.85	□□□□□ -0.67
PDE9A-222	ENST00000472401	PNMA6E	A0A0J9YXQ4	647 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	NCK2	O43639	380 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CSPG5	O95196	566 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	IGHD	P01880	384 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CDK8	P49336	464 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CPT1A	P50416	773 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CHMP4BP1	P59074	171 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	IKBKE	Q14164	716 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CBX2	Q14781	532 aa	Predicted RBP	10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	FBXO11	Q86XK2	927 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	TMEM192	Q8IY95	271 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	MYOCD	Q8IZQ8	938 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	CCDC155	Q8N6L0	562 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	OR6J1	Q8NGC5	347 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	PURB	Q96QR8	312 aa	Known RBP	10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	IGFLR1	Q9H665	355 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	ACAD9	Q9H845	621 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	VTA1	Q9NP79	307 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	ZBTB40	Q9NUA8	1239 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	PCDHB15	Q9Y5E8	787 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	ATG2A	Q2TAZ0	1938 aa		10.84	□□□□□ -0.67
PDE9A-222	ENST00000472401	SPTBN2	O15020	2390 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	TRIP12	Q14669	1992 aa	Predicted RBP	10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	CEP250	Q9BV73	2442 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	USP17L12	C9JPN9	530 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	USP17L21	D6R901	530 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	EFCAB14	O75071	495 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	NUBP1	P53384	320 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	PTPN11	Q06124	597 aa	Predicted RBP	10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	MBTPS1	Q14703	1052 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	GDF6	Q6KF10	455 aa	Predicted RBP	10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	LCORL	Q8N3X6	602 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	TMEM105	Q8N8V8	129 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	MSLNL	Q96KJ4	702 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	BACH2	Q9BYV9	841 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	WDR11	Q9BZH6	1224 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	GPR108	Q9NPR9	543 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	INCENP	Q9NQS7	918 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	RNF146	Q9NTX7	359 aa		10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	DBNL	Q9UJU6	430 aa	Known RBP	10.83	□□□□□ -0.68
PDE9A-222	ENST00000472401	MAP1B	P46821	2468 aa	Known RBP	10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401		F5H6K3	240 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	GRM6	O15303	877 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	EYA4	O95677	639 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	CKB	P12277	381 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	KLRC3	Q07444	240 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	RBL2	Q08999	1139 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	TRAF7	Q6Q0C0	670 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	C16orf86	Q6ZW13	317 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	SMRP1	Q8NCR6	262 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	YME1L1	Q96TA2	773 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	MYH8	P13535	1937 aa		10.82	□□□□□ -0.68
PDE9A-222	ENST00000472401	PRKAB2	O43741	272 aa		10.81	□□□□□ -0.68
PDE9A-222	ENST00000472401	LGR5	O75473	907 aa		10.81	□□□□□ -0.68
PDE9A-222	ENST00000472401	AMH	P03971	560 aa		10.81	□□□□□ -0.68
PDE9A-222	ENST00000472401	PDE6A	P16499	860 aa		10.81	□□□□□ -0.68
PDE9A-222	ENST00000472401	ICAM3	P32942	547 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms