RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
SGCE-210ENST00000472326 CDC6Q99741 560 aa10.37□□□□□ -0.75
SGCE-210ENST00000472326 TIMM13Q9Y5L4 95 aaPredicted RBP10.37□□□□□ -0.75
SGCE-210ENST00000472326 F8W031 263 aaPredicted RBP10.36□□□□□ -0.75
SGCE-210ENST00000472326 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 C8AP07357 584 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
SGCE-210ENST00000472326 TESK1Q15569 626 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 PLEKHN1Q494U1 663 aaPredicted RBP10.36□□□□□ -0.75
SGCE-210ENST00000472326 PAQR3Q6TCH7 311 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 KCNT2Q6UVM3 1135 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 CEP68Q76N32 757 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 NLRP10Q86W26 655 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 KCNN1Q92952 543 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 SLC38A3Q99624 504 aa10.36□□□□□ -0.75
SGCE-210ENST00000472326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.36□□□□□ -0.75
SGCE-210ENST00000472326 ETV2O00321 342 aaPredicted RBP10.35□□□□□ -0.75
SGCE-210ENST00000472326 MYO1BO43795 1136 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 MSCO60682 206 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 PEX10O60683 326 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 NTRK1P04629 796 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 CABP7Q86V35 215 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 EXOC2Q96KP1 924 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 NPFFR2Q9Y5X5 522 aa10.35□□□□□ -0.75
SGCE-210ENST00000472326 TRBV23-1A0A0A0MS06 115 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 C22orf46C9J442 243 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 KRT1P04264 644 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 CBX2Q14781 532 aaPredicted RBP10.34□□□□□ -0.75
SGCE-210ENST00000472326 NR1I3Q14994 352 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 NFE2L2Q16236 605 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 WWC2Q6AWC2 1192 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 LILRB2Q8N423 598 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 PIF1Q9H611 641 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 MBD1Q9UIS9 605 aaPredicted RBP10.34□□□□□ -0.75
SGCE-210ENST00000472326 DBR1Q9UK59 544 aaKnown RBP10.34□□□□□ -0.75
SGCE-210ENST00000472326 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 SIT1Q9Y3P8 196 aa10.34□□□□□ -0.75
SGCE-210ENST00000472326 TEX51A0A1B0GUA7 166 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 HRKO00198 91 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 MAPKAPK2P49137 400 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 PRR5P85299 388 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 BCAS3Q9H6U6 928 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 GCM1Q9NP62 436 aa10.33□□□□□ -0.76
SGCE-210ENST00000472326 ABLIM1O14639 778 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 TMEM253P0C7T8 217 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 C1QTNF9P0C862 333 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 TMEM62Q0P6H9 643 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 ZC3H14Q6PJT7 736 aaKnown RBP10.32□□□□□ -0.76
SGCE-210ENST00000472326 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 TRMT2BQ96GJ1 504 aaKnown RBP10.32□□□□□ -0.76
SGCE-210ENST00000472326 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 MRFAP1L1Q96HT8 127 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 CNTD2Q9H8S5 307 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 GPR27Q9NS67 375 aa10.32□□□□□ -0.76
SGCE-210ENST00000472326 GTF2A2P52657 109 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 EPHB3P54753 998 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 DLG4P78352 724 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
SGCE-210ENST00000472326 PKN1Q16512 942 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 OLFML2BQ68BL8 750 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 NETO2Q8NC67 525 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 IPO9Q96P70 1041 aaKnown RBP10.31□□□□□ -0.76
SGCE-210ENST00000472326 CLDND1Q9NY35 253 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 PPARGC1AQ9UBK2 798 aaKnown RBP10.31□□□□□ -0.76
SGCE-210ENST00000472326 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 ASXL2Q76L83 1435 aa10.31□□□□□ -0.76
SGCE-210ENST00000472326 NFIBO00712 420 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 SEMA7AO75326 666 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 CDR1P51861 262 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 LSAMPQ13449 338 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 ATG14Q6ZNE5 492 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 PPP1R16BQ96T49 567 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 DHRS4Q9BTZ2 278 aa10.3□□□□□ -0.76
SGCE-210ENST00000472326 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
SGCE-210ENST00000472326 TSPAN15O95858 294 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 GLDCP23378 1020 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
SGCE-210ENST00000472326 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 LDHDQ86WU2 507 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 Q8N1Y9 231 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 THAP3Q8WTV1 239 aaPredicted RBP10.28□□□□□ -0.76
SGCE-210ENST00000472326 KANSL2Q9H9L4 492 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 PTCH2Q9Y6C5 1203 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 X6R8D5 127 aa10.28□□□□□ -0.76
SGCE-210ENST00000472326 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
SGCE-210ENST00000472326 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
SGCE-210ENST00000472326 LONRF2Q1L5Z9 754 aa10.27□□□□□ -0.77
SGCE-210ENST00000472326 C2orf27AQ580R0 203 aa10.27□□□□□ -0.77
SGCE-210ENST00000472326 RSPO2Q6UXX9 243 aaPredicted RBP10.27□□□□□ -0.77
SGCE-210ENST00000472326 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
SGCE-210ENST00000472326 KISS1RQ969F8 398 aaPredicted RBP10.27□□□□□ -0.77
SGCE-210ENST00000472326 PEX11GQ96HA9 241 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms