RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 FCER1AP12319 257 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 PLA2G4AP47712 749 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 LRRC63Q05C16 580 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 GUF1Q8N442 669 aaKnown RBP23.2■■□□□ 1.3
SNX21-209ENST00000472219 COA7Q96BR5 231 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
SNX21-209ENST00000472219 GPCPD1Q9NPB8 672 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
SNX21-209ENST00000472219 MYO6Q9UM54 1294 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 GUCA1BQ9UMX6 200 aa23.2■■□□□ 1.3
SNX21-209ENST00000472219 TBC1D8O95759 1140 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 KIAA1328Q86T90 577 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 KIAA0895Q8NCT3 520 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 RAD54LQ92698 747 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 BLOC1S4Q9NUP1 217 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 USP40Q9NVE5 1235 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 SLC26A4O43511 780 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 SEC31AO94979 1220 aaKnown RBP23.19■■□□□ 1.3
SNX21-209ENST00000472219 TNNI2P48788 182 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 CCDC122Q5T0U0 273 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 WDR59Q6PJI9 974 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 HHIPL2Q6UWX4 724 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 SNX29Q8TEQ0 813 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 CCDC17Q96LX7 622 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 TSGA10Q9BZW7 698 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 JMJD4Q9H9V9 463 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 RAB21Q9UL25 225 aa23.19■■□□□ 1.3
SNX21-209ENST00000472219 REXO2Q9Y3B8 237 aaKnown RBP23.19■■□□□ 1.3
SNX21-209ENST00000472219 EIF3CLB5ME19 914 aaKnown RBP23.18■■□□□ 1.3
SNX21-209ENST00000472219 RIMBP2O15034 1052 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 CCDC84Q86UT8 332 aaPredicted RBP23.18■■□□□ 1.3
SNX21-209ENST00000472219 ADGRF4Q8IZF3 695 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 EIF3CQ99613 913 aaKnown RBP23.18■■□□□ 1.3
SNX21-209ENST00000472219 TSG101Q99816 390 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 EHD4Q9H223 541 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 EPC1Q9H2F5 836 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 ZSWIM4Q9H7M6 989 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 KDM3AQ9Y4C1 1321 aa23.18■■□□□ 1.3
SNX21-209ENST00000472219 MYMKA6NI61 221 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 ZBTB5O15062 677 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 SLC37A4O43826 429 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 TDP2O95551 362 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 MCM6Q14566 821 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 TMEM119Q4V9L6 283 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 MIIPQ5JXC2 388 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 PNMA5Q96PV4 448 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 SLC39A2Q9NP94 309 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 AFF2P51816 1311 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 MARCH6O60337 910 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 AMPD2Q01433 879 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 GPS2Q13227 327 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 NT5C3AQ9H0P0 336 aa23.17■■□□□ 1.3
SNX21-209ENST00000472219 DDX25Q9UHL0 483 aaKnown RBP23.17■■□□□ 1.3
SNX21-209ENST00000472219 F8W031 263 aaPredicted RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 G3V3G9 751 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 NPR1P16066 1061 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 CLK2P49760 499 aaKnown RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 EIF6P56537 245 aaKnown RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 MAN2A1Q16706 1144 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 LONRF2Q1L5Z9 754 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 VWA3BQ502W6 1294 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 PROM2Q8N271 834 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 JAKMIP2Q96AA8 810 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 RPGRIP1Q96KN7 1286 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 SEMA6BQ9H3T3 888 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 ANKZF1Q9H8Y5 726 aa23.16■■□□□ 1.3
SNX21-209ENST00000472219 NHEJ1Q9H9Q4 299 aaPredicted RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 BMP2KQ9NSY1 1161 aaPredicted RBP23.16■■□□□ 1.3
SNX21-209ENST00000472219 SHMT1P34896 483 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 HERVK_113P62684 666 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 SPA17Q15506 151 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 PKNOX2Q96KN3 472 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 AGPAT5Q9NUQ2 364 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 MCM3P25205 808 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 TRAPPC11Q7Z392 1133 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 MSL3Q8N5Y2 521 aaKnown RBP23.15■■□□□ 1.3
SNX21-209ENST00000472219 MTMR8Q96EF0 704 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 FUT8Q9BYC5 575 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 UBXN6Q9BZV1 441 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 PSTPIP2Q9H939 334 aa23.15■■□□□ 1.3
SNX21-209ENST00000472219 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.3
SNX21-209ENST00000472219 ANO9A1A5B4 782 aa23.14■■□□□ 1.29
SNX21-209ENST00000472219 POTEMA6NI47 508 aa23.14■■□□□ 1.29
SNX21-209ENST00000472219 MPHOSPH10O00566 681 aaKnown RBP23.14■■□□□ 1.29
SNX21-209ENST00000472219 ABL1P00519 1130 aa23.14■■□□□ 1.29
SNX21-209ENST00000472219 HNRNPH3P31942 346 aaKnown RBP23.14■■□□□ 1.29
SNX21-209ENST00000472219 CKAP4Q07065 602 aaKnown RBP23.14■■□□□ 1.29
SNX21-209ENST00000472219 CERS5Q8N5B7 392 aa23.14■■□□□ 1.29
SNX21-209ENST00000472219 NDST4Q9H3R1 872 aa23.14■■□□□ 1.29
SNX21-209ENST00000472219 IDEP14735 1019 aa23.13■■□□□ 1.29
SNX21-209ENST00000472219 MCTP2Q6DN12 878 aa23.13■■□□□ 1.29
SNX21-209ENST00000472219 CDC42EP5Q6NZY7 148 aa23.13■■□□□ 1.29
SNX21-209ENST00000472219 ARHGAP27Q6ZUM4 889 aa23.13■■□□□ 1.29
SNX21-209ENST00000472219 HDXQ7Z353 690 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms