RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 DPH6Q7L8W6 267 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 RCBTB1Q8NDN9 531 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 DPF3Q92784 378 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 BTG4Q9NY30 223 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 KLHL14Q9P2G3 628 aa7.81□□□□□ -1.16
HDAC9-221ENST00000471887 FUCA1P04066 466 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 FAM153BP0C7A2 387 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 GLI4P10075 376 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 CBX2Q14781 532 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-221ENST00000471887 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 RSPO2Q6UXX9 243 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-221ENST00000471887 RPTNQ6XPR3 784 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-221ENST00000471887 DCAF4Q8WV16 495 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 PPP1R16BQ96T49 567 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 KCNK12Q9HB15 430 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 GPR27Q9NS67 375 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 FBLN5Q9UBX5 448 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
HDAC9-221ENST00000471887 LCP1P13796 627 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 MAPKAPK2P49137 400 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 SUMO1P63165 101 aaKnown RBP7.79□□□□□ -1.16
HDAC9-221ENST00000471887 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
HDAC9-221ENST00000471887 ZNF648Q5T619 568 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-221ENST00000471887 SYDE1Q6ZW31 735 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-221ENST00000471887 TEX2Q8IWB9 1127 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 NETO2Q8NC67 525 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 PLEKHO2Q8TD55 490 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 CHAMP1Q96JM3 812 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 DHRS4Q9BTZ2 278 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 MCOLN1Q9GZU1 580 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
HDAC9-221ENST00000471887 NUDT5Q9UKK9 219 aa7.79□□□□□ -1.16
HDAC9-221ENST00000471887 TEX51A0A1B0GUA7 166 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 MYOCOSA0A1B0GUC4 107 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 C22orf46C9J442 243 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 SEMA7AO75326 666 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 VIPR1P32241 457 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 BCL6P41182 706 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 LSAMPQ13449 338 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 NTRK3Q16288 839 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 C2orf27AQ580R0 203 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 FAM209AQ5JX71 171 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 FOXB2Q5VYV0 432 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 WWC2Q6AWC2 1192 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 ZC3H14Q6PJT7 736 aaKnown RBP7.78□□□□□ -1.16
HDAC9-221ENST00000471887 CEP68Q76N32 757 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-221ENST00000471887 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
HDAC9-221ENST00000471887 TMEM169Q96HH4 297 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 ZFYVE21Q9BQ24 234 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 SIRT5Q9NXA8 310 aa7.78□□□□□ -1.16
HDAC9-221ENST00000471887 BLACEA4D250 179 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 F8W031 263 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-221ENST00000471887 FPR2P25090 351 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 PKN1Q16512 942 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 PLEKHN1Q494U1 663 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-221ENST00000471887 STYK1Q6J9G0 422 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 TMC6Q7Z403 805 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 Q8N1Y9 231 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 KCNN1Q92952 543 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 PEX11GQ96HA9 241 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 EXOC2Q96KP1 924 aa7.77□□□□□ -1.17
HDAC9-221ENST00000471887 MRPS23Q9Y3D9 190 aaKnown RBP7.77□□□□□ -1.17
HDAC9-221ENST00000471887 ZC3H12DA2A288 527 aaKnown RBP7.76□□□□□ -1.17
HDAC9-221ENST00000471887 NTRK1P04629 796 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 TMEM253P0C7T8 217 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 MROH9Q5TGP6 573 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 DCP2Q8IU60 420 aaKnown RBP7.76□□□□□ -1.17
HDAC9-221ENST00000471887 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 PIF1Q9H611 641 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 COA3Q9Y2R0 106 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-221ENST00000471887 PTCH2Q9Y6C5 1203 aa7.76□□□□□ -1.17
HDAC9-221ENST00000471887 CCDC163A0A0D9SF12 145 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 H7BY64 318 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 NFIBO00712 420 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 GLDCP23378 1020 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 KCNT2Q6UVM3 1135 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 MAMDC2Q7Z304 686 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-221ENST00000471887 IFNL3Q8IZI9 196 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 PTPRN2Q92932 1015 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-221ENST00000471887 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 CLDND1Q9NY35 253 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 MBD1Q9UIS9 605 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-221ENST00000471887 X6R8D5 127 aa7.75□□□□□ -1.17
HDAC9-221ENST00000471887 ETV2O00321 342 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-221ENST00000471887 MSCO60682 206 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 GPR85P60893 370 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 GABREP78334 506 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 PRR5P85299 388 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 KIZQ2M2Z5 673 aa7.74□□□□□ -1.17
HDAC9-221ENST00000471887 LBX2Q6XYB7 198 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms