RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 MPHOSPH10O00566 681 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 GPAA1O43292 621 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 CTNND1O60716 968 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 CDC45O75419 566 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 REC8O95072 547 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 MBD4O95243 580 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 EGFRP00533 1210 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ZKSCAN1P17029 563 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 RASA1P20936 1047 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 CHMLP26374 656 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ADH7P40394 386 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 RHBDL3P58872 404 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 DPYDQ12882 1025 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 NMIQ13287 307 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 PABPC4Q13310 644 aaKnown RBP eCLIP3.33□□□□□ -1.88
DMD-219ENST00000471779 ARHGEF6Q15052 776 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ALX1Q15699 326 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 OCLNQ16625 522 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 IMMTQ16891 758 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 SBK1Q52WX2 424 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ARSJQ5FYB0 599 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 BMP2KLQ5H9B9 411 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 RNF20Q5VTR2 975 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 LILRA6Q6PI73 481 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 MFSD6Q6ZSS7 791 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 MIGA2Q7L4E1 593 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 RHBDD1Q8TEB9 315 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 OSBP2Q969R2 916 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ASIC4Q96FT7 647 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 TMEM39BQ9GZU3 492 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 OSBPL5Q9H0X9 879 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 RNF41Q9H4P4 317 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 UPF2Q9HAU5 1272 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 ARPP21Q9UBL0 812 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 SAP30BPQ9UHR5 308 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 SERPINB13Q9UIV8 391 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 PALD1Q9ULE6 856 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 SCAF8Q9UPN6 1271 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 CTDP1Q9Y5B0 961 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 HRH3Q9Y5N1 445 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 GAKO14976 1311 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 EP400Q96L91 3159 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 ZNF609O15014 1411 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 COL11A2P13942 1736 aaPredicted RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 SCN4AP35499 1836 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 SPEF2Q9C093 1822 aa3.33□□□□□ -1.88
DMD-219ENST00000471779 BRCA1P38398 1863 aaKnown RBP3.33□□□□□ -1.88
DMD-219ENST00000471779 POLR2AP24928 1970 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 TCRBV5S4A2TA0A5A2 114 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 DDTLA6NHG4 134 aaPredicted RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 MANSC4A6NHS7 340 aaPredicted RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 TSPY2A6NKD2 308 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 GSG1L2A8MUP6 293 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 C19orf81C9J6K1 198 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 CXCL11O14625 94 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 PRKAB2O43741 272 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 RANBP6O60518 1105 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 GNRH1P01148 92 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 IGLV1-40P01703 118 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 FGAP02671 866 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ASNSP08243 561 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 FAM157BP0CG42 384 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 TSPY3P0CV98 308 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 TSPY8P0CW00 308 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 HSPD1P10809 573 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 CETPP11597 493 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 PSMA5P28066 241 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 MAP2K2P36507 400 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 GRIK1P39086 918 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 CDK8P49336 464 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 NT5C2P49902 561 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 GTF2A2P52657 109 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 USP14P54578 494 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 FGD1P98174 961 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ATP2B2Q01814 1243 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 MAP2K1Q02750 393 aaPredicted RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 PPATQ06203 517 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 SREBF2Q12772 1141 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 NFIAQ12857 509 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 NOGQ13253 232 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 SART3Q15020 963 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 RAB3GAP1Q15042 981 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 MAP3K11Q16584 847 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ABCB5Q2M3G0 1257 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 RRP12Q5JTH9 1297 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 C12orf60Q5U649 245 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 CST9Q5W186 159 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 CTR9Q6PD62 1173 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 SYNE3Q6ZMZ3 975 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 FASTKD5Q7L8L6 764 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 RALYLQ86SE5 291 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 DTX1Q86Y01 620 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ERO1BQ86YB8 467 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ANKMY2Q8IV38 441 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 ZFPM1Q8IX07 1006 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 CCAR1Q8IX12 1150 aaKnown RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 DMRTC2Q8IXT2 367 aaPredicted RBP3.32□□□□□ -1.88
DMD-219ENST00000471779 STK11IPQ8N1F8 1099 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 TMTC2Q8N394 836 aa3.32□□□□□ -1.88
DMD-219ENST00000471779 LCORLQ8N3X6 602 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms