RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CYP3A7P24462 503 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 TNNI2P48788 182 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 CDK17Q00537 523 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 PPP2R3AQ06190 1150 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
APLF-204ENST00000471727 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ZSCAN29Q8IWY8 852 aaPredicted RBP11.87□□□□□ -0.51
APLF-204ENST00000471727 CCDC170Q8IYT3 715 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 KCTD17Q8N5Z5 321 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 SNX29Q8TEQ0 813 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
APLF-204ENST00000471727 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ERGIC2Q96RQ1 377 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 WDR24Q96S15 920 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 PLIN2Q99541 437 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 TSG101Q99816 390 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 DESI2Q9BSY9 194 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 CARD6Q9BX69 1037 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 MRPL44Q9H9J2 332 aaKnown RBP11.87□□□□□ -0.51
APLF-204ENST00000471727 BLOC1S4Q9NUP1 217 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
APLF-204ENST00000471727 EPN1Q9Y6I3 576 aaPredicted RBP11.87□□□□□ -0.51
APLF-204ENST00000471727 ANKRD31Q8N7Z5 1873 aa11.87□□□□□ -0.51
APLF-204ENST00000471727 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 TRIM49BA6NDI0 452 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 TBX3O15119 743 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 TUBBP07437 444 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 CYLC1P35663 651 aaPredicted RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 SLC1A4P43007 532 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 EIF6P56537 245 aaKnown RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 ZBED6P86452 979 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 STK4Q13043 487 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 MTF1Q14872 753 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 MEA1Q16626 185 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 DACT2Q5SW24 774 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 GMCL1P1Q8NEA9 526 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 RABGGTAQ92696 567 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 GOLGA1Q92805 767 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 CNOT6LQ96LI5 555 aaKnown RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 MBOAT7Q96N66 472 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 CDC23Q9UJX2 597 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 PCDHA12Q9UN75 941 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 TTC26A0AVF1 554 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 SLC37A4O43826 429 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 EDIL3O43854 480 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 NDUFA10O95299 355 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 TDP2O95551 362 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 ERVK-24P63145 666 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 FAM193AP78312 1265 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 CCDC84Q86UT8 332 aaPredicted RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 GMCL1Q96IK5 515 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 EDEM3Q9BZQ6 932 aa11.86□□□□□ -0.51
APLF-204ENST00000471727 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
APLF-204ENST00000471727 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
APLF-204ENST00000471727 MYMKA6NI61 221 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 PES1O00541 588 aaKnown RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 ECE2O60344 883 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 COBLO75128 1261 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 IPO7O95373 1038 aaKnown RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 EEF2P13639 858 aaKnown RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 NFIAQ12857 509 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 MCM6Q14566 821 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 ZNF569Q5MCW4 686 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 RSRC2Q7L4I2 434 aaKnown RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 KRT222Q8N1A0 295 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
APLF-204ENST00000471727 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 LZTFL1Q9NQ48 299 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
APLF-204ENST00000471727 GREB1LQ9C091 1923 aaPredicted RBP11.84□□□□□ -0.51
APLF-204ENST00000471727 FANCGO15287 622 aa11.84□□□□□ -0.51
APLF-204ENST00000471727 GNA14O95837 355 aa11.84□□□□□ -0.51
APLF-204ENST00000471727 TRIM21P19474 475 aaKnown RBP11.84□□□□□ -0.51
APLF-204ENST00000471727 MMP14P50281 582 aa11.84□□□□□ -0.51
APLF-204ENST00000471727 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
APLF-204ENST00000471727 CBX1P83916 185 aa11.84□□□□□ -0.51
APLF-204ENST00000471727 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms