RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CXCL17Q6UXB2 119 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 NYAP1Q6ZVC0 841 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 RPUSD2Q8IZ73 545 aaKnown RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 IFNL3Q8IZI9 196 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 MPHOSPH6Q99547 160 aaKnown RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 KATNBL1Q9H079 304 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 A1CFQ9NQ94 594 aaKnown RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 ADD3Q9UEY8 706 aaKnown RBP10.8□□□□□ -0.68
CPSF4-211ENST00000471455 PNMA2Q9UL42 364 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
CPSF4-211ENST00000471455 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 TSPY2A6NKD2 308 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 M0R2C6 588 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 ADCY6O43306 1168 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 SUPT20HL2P0C7V6 817 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 ACRP10323 421 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 ALAS1P13196 640 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 CYP2C18P33260 490 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
CPSF4-211ENST00000471455 BEX3Q00994 111 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 CNTN2Q02246 1040 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 PPARAQ07869 468 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
CPSF4-211ENST00000471455 BRDTQ58F21 947 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-211ENST00000471455 IQSEC1Q6DN90 963 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 C16orf59Q7L2K0 433 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 USP38Q8NB14 1042 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 SLC43A3Q8NBI5 491 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 PRDM12Q9H4Q4 367 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 GNEQ9Y223 722 aaKnown RBP10.79□□□□□ -0.68
CPSF4-211ENST00000471455 RAD50Q92878 1312 aa10.79□□□□□ -0.68
CPSF4-211ENST00000471455 CTAGE5O15320 804 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 OATP04181 439 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 IGFBP4P22692 258 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 RCSD1Q6JBY9 416 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 PPM1EQ8WY54 764 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 CCPG1Q9ULG6 757 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
CPSF4-211ENST00000471455 CDH23Q9H251 3354 aa10.77□□□□□ -0.68
CPSF4-211ENST00000471455 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 B4DLN1 442 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 DYNC1LI2O43237 492 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 RNF40O75150 1001 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 ACTN1P12814 892 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 SMPD1P17405 629 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 MCCP23508 829 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 CPT1AP50416 773 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 MRPL12P52815 198 aaKnown RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 PPP2R2DQ66LE6 453 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 DIEXFQ68CQ4 756 aaKnown RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 NSMFQ6X4W1 530 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 OTOP2Q7RTS6 562 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 FBXO16Q8IX29 292 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 DCAF4Q8WV16 495 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 ASB2Q96Q27 587 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
CPSF4-211ENST00000471455 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 PCDHA11Q9Y5I1 949 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 LRRC37A2A6NM11 1700 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 ASTN1O14525 1302 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 ZNF536O15090 1300 aa10.77□□□□□ -0.69
CPSF4-211ENST00000471455 VCANP13611 3396 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-211ENST00000471455 ICAM1P05362 532 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 RFC2P35250 354 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 CCL23P55773 120 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 ZMYM1Q5SVZ6 1142 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 TSHZ3Q63HK5 1081 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 KIAA1211Q6ZU35 1233 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 ADAMTS19Q8TE59 1207 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 MORC4Q8TE76 937 aa10.76□□□□□ -0.69
CPSF4-211ENST00000471455 UHRF1Q96T88 793 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-211ENST00000471455 ALDH8A1Q9H2A2 487 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-211ENST00000471455 CXXC1Q9P0U4 656 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-211ENST00000471455 NKRFO15226 690 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPSF4-211ENST00000471455 B4GALT4O60513 344 aa10.75□□□□□ -0.69
CPSF4-211ENST00000471455 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
CPSF4-211ENST00000471455 KPNA6O60684 536 aa10.75□□□□□ -0.69
CPSF4-211ENST00000471455 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
CPSF4-211ENST00000471455 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
CPSF4-211ENST00000471455 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-211ENST00000471455 TRPV6Q9H1D0 765 aa10.75□□□□□ -0.69
CPSF4-211ENST00000471455 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
CPSF4-211ENST00000471455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms