RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SEPHS1P49903 392 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 MECP2P51608 486 aaKnown RBP8.71□□□□□ -1.02
SMC5-202ENST00000471372 TCIRG1Q13488 830 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 INAVAQ3KP66 663 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 PRRT3Q5FWE3 981 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 PPP4R4Q6NUP7 873 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 HDGFL2Q7Z4V5 671 aaPredicted RBP8.71□□□□□ -1.02
SMC5-202ENST00000471372 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.02
SMC5-202ENST00000471372 CHST14Q8NCH0 376 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 PCGF6Q9BYE7 350 aa8.71□□□□□ -1.02
SMC5-202ENST00000471372 EIF3JO75822 258 aaKnown RBP8.7□□□□□ -1.02
SMC5-202ENST00000471372 BMP3P12645 472 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 MAP4P27816 1152 aaKnown RBP8.7□□□□□ -1.02
SMC5-202ENST00000471372 TNK2Q07912 1038 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 E4F1Q66K89 784 aaPredicted RBP8.7□□□□□ -1.02
SMC5-202ENST00000471372 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 TPH2Q8IWU9 490 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 RCBTB1Q8NDN9 531 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 DIO2Q92813 273 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMC5-202ENST00000471372 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 SLC12A9Q9BXP2 914 aa8.7□□□□□ -1.02
SMC5-202ENST00000471372 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
SMC5-202ENST00000471372 FAM95CA0A1B0GW59 222 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 FZD9O00144 591 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 NOS3P29474 1203 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 KIR3DL1P43629 444 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 DNM2P50570 870 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 KCNAB2Q13303 367 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 HLTFQ14527 1009 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMC5-202ENST00000471372 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 GFOD2Q3B7J2 385 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 OVCH1Q7RTY7 1134 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 MPHOSPH6Q99547 160 aaKnown RBP8.69□□□□□ -1.02
SMC5-202ENST00000471372 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
SMC5-202ENST00000471372 PPARGC1AQ9UBK2 798 aaKnown RBP8.69□□□□□ -1.02
SMC5-202ENST00000471372 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 CCDC66A2RUB6 948 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 ULK1O75385 1050 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 SOD2P04179 222 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 VAV1P15498 845 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 BMP8BP34820 402 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 GRIK1P39086 918 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 NOP2P46087 812 aaKnown RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 KPNA1P52294 538 aaPredicted RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 PCBP2Q15366 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMC5-202ENST00000471372 INF2Q27J81 1249 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 PLA2G4EQ3MJ16 856 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 RCSD1Q6JBY9 416 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 C11orf74Q86VG3 221 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 KSR1Q8IVT5 923 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 CISD2Q8N5K1 135 aaKnown RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 LENG1Q96BZ8 264 aaPredicted RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 AHCYL2Q96HN2 611 aaKnown RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 HEXIM2Q96MH2 286 aaKnown RBP8.68□□□□□ -1.02
SMC5-202ENST00000471372 IPPKQ9H8X2 491 aa8.68□□□□□ -1.02
SMC5-202ENST00000471372 VSTM5A8MXK1 200 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 MSTNO14793 375 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMC5-202ENST00000471372 CCND1P24385 295 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 IREB2P48200 963 aaKnown RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 OCRLQ01968 901 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 KLF1Q13351 362 aaPredicted RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 HDAC1Q13547 482 aaPredicted RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 KIZQ2M2Z5 673 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 CREB3L3Q68CJ9 461 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 MBLAC2Q68D91 279 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 ARMC10Q8N2F6 343 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 ZNF655Q8N720 491 aaPredicted RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 ENOX1Q8TC92 643 aaKnown RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 WFDC12Q8WWY7 111 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 UTP4Q969X6 686 aaKnown RBP8.67□□□□□ -1.02
SMC5-202ENST00000471372 MYRFLQ96LU7 910 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 PCDHA2Q9Y5H9 948 aa8.67□□□□□ -1.02
SMC5-202ENST00000471372 WNT9AO14904 365 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 SNUPNO95149 360 aaKnown RBP8.66□□□□□ -1.02
SMC5-202ENST00000471372 GSTM1P09488 218 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 CT47B1P0C2W7 299 aaPredicted RBP8.66□□□□□ -1.02
SMC5-202ENST00000471372 FAM47CQ5HY64 1035 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 CXorf57Q6NSI4 855 aaKnown RBP8.66□□□□□ -1.02
SMC5-202ENST00000471372 DGKHQ86XP1 1220 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 SLC13A1Q9BZW2 595 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 C14orf119Q9NWQ9 140 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 OXSMQ9NWU1 459 aa8.66□□□□□ -1.02
SMC5-202ENST00000471372 OBP2AQ9NY56 170 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms