RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 FAM184AQ8NB25 1140 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 SMARCC2Q8TAQ2 1214 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 EDEM1Q92611 657 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 LY9Q9HBG7 655 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 INCENPQ9NQS7 918 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 TCP11L1Q9NUJ3 509 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 HDAC9Q9UKV0 1011 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 ZDHHC9Q9Y397 364 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 KCNMB2Q9Y691 235 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 TACC3Q9Y6A5 838 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 TIAM2Q8IVF5 1701 aa7.09□□□□□ -1.27
SMNDC1-204ENST00000471297 ROBO3Q96MS0 1386 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 KIF13BQ9NQT8 1826 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 DLEC1Q9Y238 1755 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 FLT1P17948 1338 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 LTBP3Q9NS15 1303 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CYP2D7A0A087X1C5 515 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CCDC196A0A1B0GTZ2 297 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 YDJCA8MPS7 323 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 GOLGA8BA8MQT2 603 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CPLX1O14810 134 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 ZBTB43O43298 467 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 WIPF1O43516 503 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 RANBP6O60518 1105 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 XYLBO75191 536 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 BAG4O95429 457 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CALM1P0DP23 149 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CALM2P0DP24 149 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CALM3P0DP25 149 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 ZSCAN22P10073 491 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CYP2D6P10635 497 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 TARSP26639 723 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 IARSP41252 1262 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 METAP2P50579 478 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 CCT2P78371 535 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 PKP1Q13835 747 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 SEC23AQ15436 765 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 SKOR2Q2VWA4 1001 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 APOBEC3HQ6NTF7 200 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 KIAA0825Q8IV33 1275 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 MAPKAPK5Q8IW41 473 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 NSUN7Q8NE18 718 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 JDP2Q8WYK2 163 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 ANKS1AQ92625 1134 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 MXD3Q9BW11 206 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 TAOK3Q9H2K8 898 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 MKNK2Q9HBH9 465 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 SPON1Q9HCB6 807 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 KCNQ5Q9NR82 932 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 PPP1R1BQ9UD71 204 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 LAMA4Q16363 1823 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 NID2Q14112 1375 aa7.08□□□□□ -1.28
SMNDC1-204ENST00000471297 TNKSO95271 1327 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 TSPY2A6NKD2 308 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 GOLGA8AA7E2F4 631 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 FZD6O60353 706 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 SASH3O75995 380 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 CTDNEP1O95476 244 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 F13A1P00488 732 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 EGFRP00533 1210 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 HLA-DOAP06340 250 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 SLURP2P0DP57 97 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 PCSK2P16519 638 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 CDK8P49336 464 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 RBM5P52756 815 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 PCBP4P57723 403 aaKnown RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 ARHGAP4P98171 946 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 TNIP1Q15025 636 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 IFIT1BQ5T764 474 aaKnown RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 CDC42EP5Q6NZY7 148 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 C16orf86Q6ZW13 317 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 STK11IPQ8N1F8 1099 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 AGBL3Q8NEM8 1001 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 BHMTQ93088 406 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 PNMA5Q96PV4 448 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 IDI2Q9BXS1 227 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 DHX36Q9H2U1 1008 aaKnown RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 ZSCAN16Q9H4T2 348 aaPredicted RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 ZNF277Q9NRM2 450 aaPredicted RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 KLF15Q9UIH9 416 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 POLIQ9UNA4 740 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 MTMR6Q9Y217 621 aa7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 FNDC3AQ9Y2H6 1198 aaKnown RBP7.07□□□□□ -1.28
SMNDC1-204ENST00000471297 MYH2Q9UKX2 1941 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 PTPDC1A2A3K4 754 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 VPS37CA5D8V6 355 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 H3BQV1 296 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 PSMD14O00487 310 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 ENTPD3O75355 529 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 WDHD1O75717 1129 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 RAD17O75943 681 aa7.06□□□□□ -1.28
SMNDC1-204ENST00000471297 DDAH1O94760 285 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms