RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SLC35F1Q5T1Q4 408 aa8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 ZSCAN18Q8TBC5 510 aaPredicted RBP8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRPF40A-206ENST00000471167 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 NTRK1P04629 796 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 ASGR2P07307 311 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 ECI1P42126 302 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 TMEM62Q0P6H9 643 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 EEPD1Q7L9B9 569 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 TEX2Q8IWB9 1127 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 RCBTB1Q8NDN9 531 aa8.03□□□□□ -1.12
PRPF40A-206ENST00000471167 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 NPHS1O60500 1241 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 SNRPB2P08579 225 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 LIMS1P48059 325 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 VMACQ2NL98 169 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 OLFML2BQ68BL8 750 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 TP53I13Q8NBR0 393 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 TSPAN17Q96FV3 270 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 LRP2BPQ9P2M1 347 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 MSRB2Q9Y3D2 182 aa8.02□□□□□ -1.13
PRPF40A-206ENST00000471167 DLX3O60479 287 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 TRIM13O60858 407 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 FPR2P25090 351 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 ZNF385BQ569K4 471 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 WWC2Q6AWC2 1192 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 Q8N1Y9 231 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 NETO2Q8NC67 525 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 SYT3Q9BQG1 590 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 ARHGEF4Q9NR80 690 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 MARCH2Q9P0N8 246 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
PRPF40A-206ENST00000471167 A0A1W2PQJ5 194 aa8□□□□□ -1.13
PRPF40A-206ENST00000471167 SGSM2O43147 1006 aa8□□□□□ -1.13
PRPF40A-206ENST00000471167 PMLP29590 882 aa8□□□□□ -1.13
PRPF40A-206ENST00000471167 BCL6P41182 706 aa8□□□□□ -1.13
PRPF40A-206ENST00000471167 ACBD5Q5T8D3 534 aaPredicted RBP8□□□□□ -1.13
PRPF40A-206ENST00000471167 E4F1Q66K89 784 aaPredicted RBP8□□□□□ -1.13
PRPF40A-206ENST00000471167 EPN3Q9H201 632 aa8□□□□□ -1.13
PRPF40A-206ENST00000471167 FFAR3O14843 346 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 MSCO60682 206 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 DLX2Q07687 328 aaPredicted RBP7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 CNKSR3Q6P9H4 555 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 TTLL10Q6ZVT0 673 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 DIO2Q92813 273 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 KCNC2Q96PR1 638 aa7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 TIMM13Q9Y5L4 95 aaPredicted RBP7.99□□□□□ -1.13
PRPF40A-206ENST00000471167 C22orf46C9J442 243 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 AFF3P51826 1226 aaKnown RBP7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 HTRA3P83110 453 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 FOXO4P98177 505 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 NTRK3Q16288 839 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 VWA3BQ502W6 1294 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 YOD1Q5VVQ6 348 aaPredicted RBP7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 PPIL6Q8IXY8 311 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 MARCH10Q8NA82 808 aaPredicted RBP7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 OSBP2Q969R2 916 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 PWWP2AQ96N64 755 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 C8orf37Q96NL8 207 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 X6R8D5 127 aa7.98□□□□□ -1.13
PRPF40A-206ENST00000471167 MEFVO15553 781 aaPredicted RBP7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 CPP00450 1065 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 KCNJ6P48051 423 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 IQCEQ6IPM2 695 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 USP33Q8TEY7 942 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
PRPF40A-206ENST00000471167 MAP4K2Q12851 820 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 TCERG1LQ5VWI1 586 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 CEP68Q76N32 757 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 ADGRG2Q8IZP9 1017 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 FNIP1Q8TF40 1166 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 ALG3Q92685 438 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 PEX11GQ96HA9 241 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 TANGO6Q9C0B7 1094 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 RNF38Q9H0F5 515 aa7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 R3HCC1Q9Y3T6 440 aaKnown RBP7.96□□□□□ -1.14
PRPF40A-206ENST00000471167 ADCY3O60266 1144 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 INHBBP09529 407 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 NCAM1P13591 858 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 BMP7P18075 431 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 LTBRP36941 435 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 RPL11P62913 178 aaKnown RBP7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 KCNAB2Q13303 367 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 TARBP2Q15633 366 aaKnown RBP7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 B3GNT8Q7Z7M8 397 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 RIOX2Q8IUF8 465 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 ST13P5Q8NFI4 369 aaPredicted RBP7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 SGSM3Q96HU1 749 aa7.95□□□□□ -1.14
PRPF40A-206ENST00000471167 PPARGC1AQ9UBK2 798 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms