RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ROBO3Q96MS0 1386 aa6.51□□□□□ -1.37
HDAC8-216ENST00000470998 NEDD4P46934 1319 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF646O15015 1829 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 MAST2Q6P0Q8 1798 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 SSC5DA1L4H1 1573 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 TCP10L2B9ZVM9 353 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF500O60304 480 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 WDHD1O75717 1129 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 BAG3O95817 575 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 GNRH1P01148 92 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 FDPSP14324 419 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 U2AF2P26368 475 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ME1P48163 572 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 GTF2A2P52657 109 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 TERF1P54274 439 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 CCT2P78371 535 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 AKAP17AQ02040 695 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 TYRO3Q06418 890 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 PDE4BQ07343 736 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 SSRP1Q08945 709 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 STK38Q15208 465 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ZRSR1Q15695 479 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 STX1AQ16623 288 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 FOXD4L6Q3SYB3 417 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 RILPL1Q5EBL4 403 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 APOBEC3HQ6NTF7 200 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 FBXO46Q6PJ61 603 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 FOXD4L3Q6VB84 417 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 DZIP1Q86YF9 867 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 LINC00301Q8NCQ3 95 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 NSUN4Q96CB9 384 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ERO1AQ96HE7 468 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 TEPSINQ96N21 525 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 USP28Q96RU2 1077 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 PYM1Q9BRP8 204 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ALG1Q9BT22 464 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 FOXP1Q9H334 677 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ARMT1Q9H993 441 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 NCOA5Q9HCD5 579 aaKnown RBP6.5□□□□□ -1.37
HDAC8-216ENST00000470998 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 RAB6BQ9NRW1 208 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ANO10Q9NW15 660 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 NOD1Q9Y239 953 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 ZKSCAN5Q9Y2L8 839 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 CSADQ9Y600 493 aa6.5□□□□□ -1.37
HDAC8-216ENST00000470998 AKAP11Q9UKA4 1901 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 FAM237AA0A1B0GTK4 181 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 A0A1W2PRU2 124 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 SPTLC2O15270 562 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 LZTS3O60299 673 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 PTMAP06454 111 aaKnown RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 CMA1P23946 247 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 KIF5BP33176 963 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 GNAQP50148 359 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 TPM4P67936 248 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 GNL2Q13823 731 aaKnown RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 COL9A3Q14050 684 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 NTRK3Q16288 839 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 ANO1Q5XXA6 986 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 SARM1Q6SZW1 724 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 CATIPQ7Z7H3 387 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 CEP57L1Q8IYX8 460 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF654Q8IZM8 581 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 FAM151AQ8WW52 585 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 OPTNQ96CV9 577 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 BPIFA3Q9BQP9 254 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 ZSWIM5Q9P217 1185 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 ABCF2Q9UG63 623 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-216ENST00000470998 TNKSO95271 1327 aa6.49□□□□□ -1.37
HDAC8-216ENST00000470998 IGF2BP3O00425 579 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 NEMFO60524 1076 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 CUTAO60888 179 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 LIG1P18858 919 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 CDC25BP30305 580 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 TRAPPC10P48553 1259 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 CLN3Q13286 438 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 NCOA4Q13772 614 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 VGLL4Q14135 290 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 SLC39A14Q15043 492 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 SEC23AQ15436 765 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 GRIK5Q16478 980 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 IFIT1BQ5T764 474 aaKnown RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 KRT40Q6A162 431 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 DGKHQ86XP1 1220 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ERO1BQ86YB8 467 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms