RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CTAGE5O15320 804 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 ZEB2O60315 1214 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 PQBP1O60828 265 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 PLEKHA8P1O95397 391 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 EIF2AK2P19525 551 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 SMARCA1P28370 1054 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 HSD17B4P51659 736 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 CMTR1Q8N1G2 835 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 IWS1Q96ST2 819 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 LBHD1Q9BQE6 289 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 MAP3K20Q9NYL2 800 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 SEC63Q9UGP8 760 aaKnown RBP18.17■□□□□ 0.5
HDAC6-218ENST00000470942 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
HDAC6-218ENST00000470942 GCOM1H8Y6P7 765 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-218ENST00000470942 HMGB1P09429 215 aaKnown RBP18.16■□□□□ 0.5
HDAC6-218ENST00000470942 POLR2MP0CAP2 368 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 HSPA4P34932 840 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 NKX3-2P78367 333 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 FGD1P98174 961 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 PPP2R5BQ15173 497 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 STXBP2Q15833 593 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 SEPT14Q6ZU15 432 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 SRBD1Q8N5C6 995 aaKnown RBP18.16■□□□□ 0.5
HDAC6-218ENST00000470942 FANCBQ8NB91 859 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 SCFD2Q8WU76 684 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 JAKMIP1Q96N16 626 aaKnown RBP18.16■□□□□ 0.5
HDAC6-218ENST00000470942 UBE2OQ9C0C9 1292 aaKnown RBP18.16■□□□□ 0.5
HDAC6-218ENST00000470942 PXMP2Q9NR77 195 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 ELP1O95163 1332 aa18.16■□□□□ 0.5
HDAC6-218ENST00000470942 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
HDAC6-218ENST00000470942 CPA1P15085 419 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 BMP8BP34820 402 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 TTLL4Q14679 1199 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 CXCL17Q6UXB2 119 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 SAMD3Q8N6K7 520 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 KCNB2Q92953 911 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 PDLIM7Q9NR12 457 aa18.15■□□□□ 0.5
HDAC6-218ENST00000470942 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-218ENST00000470942 A0A0U1RQG5 324 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-218ENST00000470942 DCDC2CA8MYV0 355 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 NKRFO15226 690 aaKnown RBP eCLIP18.14■□□□□ 0.49
HDAC6-218ENST00000470942 CABYRO75952 493 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 NR3C2P08235 984 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 CLTBP09497 229 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 MYCLP12524 364 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-218ENST00000470942 GHRHRQ02643 423 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 APOA5Q6Q788 366 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 COPS5Q92905 334 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
HDAC6-218ENST00000470942 KLF18A0A0U1RQI7 1052 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 A0A1W2PPC1 479 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 ARVCFO00192 962 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 ZBTB43O43298 467 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
HDAC6-218ENST00000470942 BRDTQ58F21 947 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-218ENST00000470942 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 TOX2Q96NM4 488 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 RBM28Q9NW13 759 aaKnown RBP18.13■□□□□ 0.49
HDAC6-218ENST00000470942 LTBP2Q14767 1821 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 MYH7BA7E2Y1 1941 aa18.13■□□□□ 0.49
HDAC6-218ENST00000470942 hCG_1642624A0A1W2PR95 340 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 ARIH2O95376 493 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 MYL3P08590 195 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 CPT1AP50416 773 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 FXR1P51114 621 aaKnown RBP eCLIP18.12■□□□□ 0.49
HDAC6-218ENST00000470942 RTN1Q16799 776 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 Q6ZUG5 572 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 ANKRD33Q7Z3H0 272 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 CUL5Q93034 780 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-218ENST00000470942 PDCD2LQ9BRP1 358 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 POLR3EQ9NVU0 708 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
HDAC6-218ENST00000470942 RANBP2P49792 3224 aaKnown RBP18.11■□□□□ 0.49
HDAC6-218ENST00000470942 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 GOLGA8BA8MQT2 603 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 PSMA5P28066 241 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 CDK7P50613 346 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 FAAP100Q0VG06 881 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 PGM5Q15124 567 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 BADQ92934 168 aa18.11■□□□□ 0.49
HDAC6-218ENST00000470942 TLR3O15455 904 aaKnown RBP18.1■□□□□ 0.49
HDAC6-218ENST00000470942 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
HDAC6-218ENST00000470942 RAG1P15918 1043 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
HDAC6-218ENST00000470942 RPS6KB1P23443 525 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms