RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 PCDHA2Q9Y5H9 948 aa5.61□□□□□ -1.51
PRPF3-204ENST00000470824 TIMM13Q9Y5L4 95 aaPredicted RBP5.61□□□□□ -1.51
PRPF3-204ENST00000470824 GSTA4O15217 222 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 NPHS1O60500 1241 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 PDGFRBP09619 1106 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 KCNA6P17658 529 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 PMLP29590 882 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 GRIK1P39086 918 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 SCNN1BP51168 640 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 STRN3Q13033 797 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 LSAMPQ13449 338 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 PLEKHG6Q3KR16 790 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 STRA8Q7Z7C7 330 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 KIF18BQ86Y91 864 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 PCDH19Q8TAB3 1148 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 STAG1Q8WVM7 1258 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 CHAMP1Q96JM3 812 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 ORAI3Q9BRQ5 295 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRPF3-204ENST00000470824 ERVK13-1Q9NX77 482 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 TNFRSF10DQ9UBN6 386 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 ZNF281Q9Y2X9 895 aa5.6□□□□□ -1.51
PRPF3-204ENST00000470824 C7orf72A4D263 438 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 FAM47E-STBD1D6RA91 191 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 BRINP1O60477 761 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 EYA4O95677 639 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 TGFB1P01137 390 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 SOD2P04179 222 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 SRGAP2CP0DJJ0 459 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 HOXA10P31260 410 aaPredicted RBP5.59□□□□□ -1.51
PRPF3-204ENST00000470824 EVA1CP58658 441 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 RPL11P62913 178 aaKnown RBP5.59□□□□□ -1.51
PRPF3-204ENST00000470824 IKZF1Q13422 519 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 SEPT7Q16181 437 aaKnown RBP5.59□□□□□ -1.51
PRPF3-204ENST00000470824 FAM47CQ5HY64 1035 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 MBLAC2Q68D91 279 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 INTS5Q6P9B9 1019 aaKnown RBP5.59□□□□□ -1.51
PRPF3-204ENST00000470824 ABHD17CQ6PCB6 329 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 STK11IPQ8N1F8 1099 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 IGSF22Q8N9C0 903 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 TMEM52Q8NDY8 209 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 OR2W6PQ8NHA6 318 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 USP7Q93009 1102 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
PRPF3-204ENST00000470824 BSDC1Q9NW68 430 aaPredicted RBP5.59□□□□□ -1.51
PRPF3-204ENST00000470824 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
PRPF3-204ENST00000470824 WNT9AO14904 365 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 ZEB2O60315 1214 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 S100BP04271 92 aaPredicted RBP5.58□□□□□ -1.52
PRPF3-204ENST00000470824 CKMP06732 381 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 BCL6P41182 706 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 ST5P78524 1137 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 SART3Q15020 963 aaKnown RBP5.58□□□□□ -1.52
PRPF3-204ENST00000470824 WDR66Q8TBY9 1149 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 PANK1Q8TE04 598 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 TTC1Q99614 292 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 CELF4Q9BZC1 486 aaKnown RBP5.58□□□□□ -1.52
PRPF3-204ENST00000470824 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 CARS2Q9HA77 564 aaKnown RBP5.58□□□□□ -1.52
PRPF3-204ENST00000470824 CABP5Q9NP86 173 aa5.58□□□□□ -1.52
PRPF3-204ENST00000470824 A0A1W2PQ45 241 aaPredicted RBP5.57□□□□□ -1.52
PRPF3-204ENST00000470824 A0A1W2PQY0 241 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 H7BY64 318 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 M0R2C6 588 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 CBX4O00257 560 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 GLRX3O76003 335 aaKnown RBP5.57□□□□□ -1.52
PRPF3-204ENST00000470824 GRK2P25098 689 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 GRK3P35626 688 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 DNM2P50570 870 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 EXOSC10Q01780 885 aaKnown RBP5.57□□□□□ -1.52
PRPF3-204ENST00000470824 BNIP3Q12983 259 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 DUSP4Q13115 394 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 MSMPQ1L6U9 139 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 RNF219Q5W0B1 726 aaPredicted RBP5.57□□□□□ -1.52
PRPF3-204ENST00000470824 CEP68Q76N32 757 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 PI4K2BQ8TCG2 481 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 TMEM169Q96HH4 297 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 MAP6Q96JE9 813 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 IFT22Q9H7X7 185 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 BTG4Q9NY30 223 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 CLDND1Q9NY35 253 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 SLC5A6Q9Y289 635 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 ZKSCAN5Q9Y2L8 839 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 COQ6Q9Y2Z9 468 aa5.57□□□□□ -1.52
PRPF3-204ENST00000470824 CCDC66A2RUB6 948 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 FADS2P1A8MWK0 482 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 GAS7O60861 476 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 COBLO75128 1261 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 F2P00734 622 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 KIR2DL1P43626 348 aaPredicted RBP5.56□□□□□ -1.52
PRPF3-204ENST00000470824 KIR2DL2P43627 348 aaPredicted RBP5.56□□□□□ -1.52
PRPF3-204ENST00000470824 GUCY2FP51841 1108 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 ZP2Q05996 745 aa5.56□□□□□ -1.52
PRPF3-204ENST00000470824 FAM50AQ14320 339 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms