RNA–Protein interactions for RNA: ENST00000470791.1

CPS1-206, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-206ENST00000470791 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
CPS1-206ENST00000470791 CNOT11Q9UKZ1 510 aaKnown RBP6.9□□□□□ -1.3
CPS1-206ENST00000470791 C7orf72A4D263 438 aa6.89□□□□□ -1.31
CPS1-206ENST00000470791 GJA9P57773 515 aa6.89□□□□□ -1.31
CPS1-206ENST00000470791 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
CPS1-206ENST00000470791 UBXN11Q5T124 520 aa6.89□□□□□ -1.31
CPS1-206ENST00000470791 NT5DC4Q86YG4 428 aa6.89□□□□□ -1.31
CPS1-206ENST00000470791 CRACR2BQ8N4Y2 399 aaPredicted RBP6.89□□□□□ -1.31
CPS1-206ENST00000470791 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 DCP2Q8IU60 420 aaKnown RBP6.88□□□□□ -1.31
CPS1-206ENST00000470791 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 COPS5Q92905 334 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 MMP19Q99542 508 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 NTMQ9P121 344 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 EMC9Q9Y3B6 208 aa6.88□□□□□ -1.31
CPS1-206ENST00000470791 NOBOXO60393 691 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 KCNH1O95259 989 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 C8BP07358 591 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 NAT2P11245 290 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
CPS1-206ENST00000470791 SCRN1Q12765 414 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 POMZP3Q6PJE2 187 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 GGNQ86UU5 652 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 HOMEZQ8IX15 550 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 SEC16BQ96JE7 1060 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 LNPKQ9C0E8 428 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 SPATA6Q9NWH7 488 aaPredicted RBP6.87□□□□□ -1.31
CPS1-206ENST00000470791 STRIP2Q9ULQ0 834 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 SIT1Q9Y3P8 196 aa6.87□□□□□ -1.31
CPS1-206ENST00000470791 K7ESM1 405 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 FUCA1P04066 466 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 NTRK1P04629 796 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 CYP2C8P10632 490 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 PLS3P13797 630 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 CNR2P34972 360 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
CPS1-206ENST00000470791 FERMT3Q86UX7 667 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 BVESQ8NE79 360 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 ZBTB8AQ96BR9 441 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
CPS1-206ENST00000470791 ZNF761Q86XN6 746 aaPredicted RBP6.85□□□□□ -1.31
CPS1-206ENST00000470791 TRIM59Q8IWR1 403 aa6.85□□□□□ -1.31
CPS1-206ENST00000470791 LINC00482Q8N8I6 264 aa6.85□□□□□ -1.31
CPS1-206ENST00000470791 AP5M1Q9H0R1 490 aa6.85□□□□□ -1.31
CPS1-206ENST00000470791 DUSP10Q9Y6W6 482 aa6.85□□□□□ -1.31
CPS1-206ENST00000470791 THBDP07204 575 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 NCAPHQ15003 741 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 ZNF827Q17R98 1081 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 C9orf131Q5VYM1 1079 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 GTF2IRD2BQ6EKJ0 949 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 HHIPL2Q6UWX4 724 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 ETV3LQ6ZN32 361 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 GTF2IRD2Q86UP8 949 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 MIB1Q86YT6 1006 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 DPF3Q92784 378 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 APBA2Q99767 749 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 GORASP1Q9BQQ3 440 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 GPRC5CQ9NQ84 441 aa6.84□□□□□ -1.31
CPS1-206ENST00000470791 NOP56O00567 594 aaKnown RBP6.83□□□□□ -1.32
CPS1-206ENST00000470791 SMARCA5O60264 1052 aaPredicted RBP6.83□□□□□ -1.32
CPS1-206ENST00000470791 THBS2P35442 1172 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 SMAD4Q13485 552 aaKnown RBP6.83□□□□□ -1.32
CPS1-206ENST00000470791 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 NPLOC4Q8TAT6 608 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 ADAMTS17Q8TE56 1095 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 DDX1Q92499 740 aaKnown RBP6.83□□□□□ -1.32
CPS1-206ENST00000470791 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 TGIF2Q9GZN2 237 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 NKX2-4Q9H2Z4 354 aa6.83□□□□□ -1.32
CPS1-206ENST00000470791 SLC6A11P48066 632 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 CYP4F3Q08477 520 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 INF2Q27J81 1249 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 Q8N1Y9 231 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 FRS2Q8WU20 508 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 ANAPC16Q96DE5 110 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
CPS1-206ENST00000470791 C11orf84Q9BUA3 381 aaPredicted RBP6.82□□□□□ -1.32
CPS1-206ENST00000470791 CYP26B1Q9NR63 512 aa6.82□□□□□ -1.32
CPS1-206ENST00000470791 C22orf46C9J442 243 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 SGSM2O43147 1006 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 ITGB3P05106 788 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 PPP1R14AQ96A00 147 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
CPS1-206ENST00000470791 FPR2P25090 351 aa6.8□□□□□ -1.32
CPS1-206ENST00000470791 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
CPS1-206ENST00000470791 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
CPS1-206ENST00000470791 ZXDCQ2QGD7 858 aaPredicted RBP6.8□□□□□ -1.32
CPS1-206ENST00000470791 E4F1Q66K89 784 aaPredicted RBP6.8□□□□□ -1.32
CPS1-206ENST00000470791 ZC3H18Q86VM9 953 aaKnown RBP6.8□□□□□ -1.32
CPS1-206ENST00000470791 NLRP10Q86W26 655 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms