RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 TSEN34Q9BSV6 310 aaKnown RBP12.18□□□□□ -0.46
LDHB-205ENST00000470280 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
LDHB-205ENST00000470280 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
LDHB-205ENST00000470280 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
LDHB-205ENST00000470280 SLC12A7Q9Y666 1083 aa12.18□□□□□ -0.46
LDHB-205ENST00000470280 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
LDHB-205ENST00000470280 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
LDHB-205ENST00000470280 REC8O95072 547 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 ARIH2O95376 493 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 ASGR1P07306 291 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 PDE4DQ08499 809 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 TRIM60Q495X7 471 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
LDHB-205ENST00000470280 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 TMTC3Q6ZXV5 915 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
LDHB-205ENST00000470280 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 COPS5Q92905 334 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 MAF1Q9H063 256 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
LDHB-205ENST00000470280 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
LDHB-205ENST00000470280 DNAH12Q6ZR08 3092 aa12.17□□□□□ -0.46
LDHB-205ENST00000470280 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
LDHB-205ENST00000470280 CALM1P0DP23 149 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 CALM2P0DP24 149 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 CALM3P0DP25 149 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
LDHB-205ENST00000470280 SMARCA1P28370 1054 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 GNAQP50148 359 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 FUT2Q10981 343 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 GNASQ5JWF2 1037 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 Q6ZUG5 572 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
LDHB-205ENST00000470280 RRP36Q96EU6 259 aaKnown RBP12.16□□□□□ -0.46
LDHB-205ENST00000470280 GDF15Q99988 308 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 PXMP2Q9NR77 195 aa12.16□□□□□ -0.46
LDHB-205ENST00000470280 MYH6P13533 1939 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 MOXD2PA6NHM9 499 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 NR3C2P08235 984 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
LDHB-205ENST00000470280 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 CDC27P30260 824 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
LDHB-205ENST00000470280 TLE2Q04725 743 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 FSCN1Q16658 493 aaKnown RBP12.15□□□□□ -0.46
LDHB-205ENST00000470280 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 ARHGEF16Q5VV41 709 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 BLOC1S2Q6QNY1 142 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 BRF1Q92994 677 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
LDHB-205ENST00000470280 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
LDHB-205ENST00000470280 TRIM43BA6NCK2 446 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 MEIS2O14770 477 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 ZBTB43O43298 467 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 RGS20O76081 388 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 STXBP2Q15833 593 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 RTN1Q16799 776 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 USP17L6PQ6QN14 398 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 CXCL17Q6UXB2 119 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 FCHSD1Q86WN1 690 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 PCSK9Q8NBP7 692 aaKnown RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
LDHB-205ENST00000470280 Q9Y3F1 56 aa12.14□□□□□ -0.47
LDHB-205ENST00000470280 GRIN2DO15399 1336 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 PQBP1O60828 265 aaKnown RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 ITGB8P26012 769 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 CDK7P50613 346 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
LDHB-205ENST00000470280 TRAF1Q13077 416 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 PGM5Q15124 567 aa12.13□□□□□ -0.47
LDHB-205ENST00000470280 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms