RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SLKQ9H2G2 1235 aaPredicted RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ZSWIM4Q9H7M6 989 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CLK4Q9HAZ1 481 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 PARVGQ9HBI0 331 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 FANCFQ9NPI8 374 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 FKBP14Q9NWM8 211 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 PRKAG2Q9UGJ0 569 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 FBXL5Q9UKA1 691 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 INTUQ9ULD6 942 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CEP131Q9UPN4 1083 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 PHF24Q9UPV7 400 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 MRPS23Q9Y3D9 190 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 SNX5Q9Y5X3 404 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 EID1Q9Y6B2 187 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ROCK2O75116 1388 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 AKR1B15C9JRZ8 316 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 hCG_1984214I3L0E3 225 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 NDUFAB1O14561 156 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CHUKO15111 745 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CYP27B1O15528 508 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RASA4O43374 803 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 B4GALT4O60513 344 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RNF8O76064 485 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 UPP2O95045 317 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PENKP01210 267 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 S100A6P06703 90 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 BMP2P12643 396 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PRLRP16471 622 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 FERP16591 822 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 HNRNPH1P31943 449 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 HPDP32754 393 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CSTF2P33240 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ACTN2P35609 894 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ZAP70P43403 619 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 POLD2P49005 469 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CENPAP49450 140 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 OXCT1P55809 520 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ZNF445P59923 1031 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 POLR2FP61218 127 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RAC1P63000 192 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RBL2Q08999 1139 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 NFX1Q12986 1120 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 STIM1Q13586 685 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 BRD3Q15059 726 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 SF3B3Q15393 1217 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ALFQ53S48 1182 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 BRDTQ58F21 947 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 TNNI3KQ59H18 835 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PCNX4Q63HM2 1172 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 FCRLBQ6BAA4 426 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CYB5RLQ6IPT4 315 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ARHGAP27Q6ZUM4 889 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 NCCRP1Q6ZVX7 275 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 USP51Q70EK9 711 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 INTS8Q75QN2 995 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CATSPER4Q7RTX7 472 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 TMC6Q7Z403 805 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 NANOGNBQ7Z5D8 188 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RASSF3Q86WH2 238 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 APLFQ8IW19 511 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 SLC15A3Q8IY34 581 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 IFNL3Q8IZI9 196 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CRACR2BQ8N4Y2 399 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 AADATQ8N5Z0 425 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ZBTB8BQ8NAP8 495 aaPredicted RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 GALNT6Q8NCL4 622 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PPP1R14CQ8TAE6 165 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC110Q8TBZ0 833 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RHPN1Q8TCX5 695 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 AIDAQ96BJ3 306 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 KLRG1Q96E93 195 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 DDX11Q96FC9 970 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 IFT43Q96FT9 208 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CLMNQ96JQ2 1002 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ZMAT2Q96NC0 199 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 RBM14Q96PK6 669 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 TSGA13Q96PP4 275 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CTAGE1Q96RT6 745 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CGREF1Q99674 301 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PLVAPQ9BX97 442 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PARD6BQ9BYG5 372 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 UBXN6Q9BZV1 441 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CD93Q9NPY3 652 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 AASDHPPTQ9NRN7 309 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 HESX1Q9UBX0 185 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 ZC3H7BQ9UGR2 993 aaKnown RBP5.71□□□□□ -1.5
COL3A1-205ENST00000470167 PTPRCP08575 1304 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC171Q6TFL3 1326 aa5.71□□□□□ -1.5
COL3A1-205ENST00000470167 GPRASP1Q5JY77 1395 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GOLGA6L9A6NEM1 432 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 FAM187AA6NFU0 413 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 SPATA31C2B4DYI2 1134 aa5.7□□□□□ -1.5
COL3A1-205ENST00000470167 GPR182O15218 404 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms