RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 GKAP1Q5VSY0 366 aaPredicted RBP6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ANKRD20A3Q5VUR7 823 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 MFSD14CQ5VZR4 134 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 SLFN12LQ6IEE8 588 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 RHOT2Q8IXI1 618 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 REXO1Q8N1G1 1221 aaKnown RBP6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ENOX1Q8TC92 643 aaKnown RBP6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ABCF3Q9NUQ8 709 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 SPATA31A1Q5TZJ5 1347 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 CHUKO15111 745 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ERCC3P19447 782 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 BIRC3Q13489 604 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ALX1Q15699 326 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 DOK7Q18PE1 504 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 CLEC4GQ6UXB4 293 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 TRIM72Q6ZMU5 477 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 TMCO5AQ8N6Q1 288 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 FAM167AQ96KS9 214 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 MEIS3Q99687 375 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 MCOLN1Q9GZU1 580 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 IFNKQ9P0W0 207 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 TRIM35Q9UPQ4 493 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 KIF1BO60333 1816 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 SMARCA1P28370 1054 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 RGMBQ6NW40 437 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 PDXDC1Q6P996 788 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 APBB2Q92870 758 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 ATP6V0A1Q93050 837 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 SERPINI1Q99574 410 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 CREBZFQ9NS37 354 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 TXLNGQ9NUQ3 528 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 EPS15L1Q9UBC2 864 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 STX8Q9UNK0 236 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 PNPLA6Q8IY17 1366 aa6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 RNF17Q9BXT8 1623 aaKnown RBP6.7□□□□□ -1.34
CCDC144A-212ENST00000470068 NDUFAB1O14561 156 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PSMD3O43242 534 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 SUN1O94901 812 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MYBL1P10243 752 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 IL6STP40189 918 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MFAP3P55082 362 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MTX1Q13505 466 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ARHGEF18Q6ZSZ5 1173 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TEX11Q8IYF3 940 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 DHX38Q92620 1227 aaKnown RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MCUR1Q96AQ8 359 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 DHX58Q96C10 678 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CCDC97Q96F63 343 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CABS1Q96KC9 395 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 RAB20Q9NX57 234 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PNMA3Q9UL41 463 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ATP11BQ9Y2G3 1177 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 SCINQ9Y6U3 715 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 UNC13BO14795 1591 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 HNRNPRO43390 633 aaKnown RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 HIP1RO75146 1068 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 BBOX1O75936 387 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ZNF202O95125 648 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TNNC2P02585 160 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 H2AFZP0C0S5 128 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TMOD1P28289 359 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TPD52P55327 224 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 IL9RQ01113 521 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 KLHL30Q0D2K2 578 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 H2AFVQ71UI9 128 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 REM2Q8IYK8 340 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 RNF168Q8IYW5 571 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 NDUFAF2Q8N183 169 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 LRRC37BQ96QE4 947 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 FRMD8P1Q9BZ68 369 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PRDM16Q9HAZ2 1276 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ZNF212Q9UDV6 495 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ZMYND8Q9ULU4 1186 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 E7EVH7 732 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 ZEB2O60315 1214 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 FARP2O94887 1054 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PCSK2P16519 638 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MUTP22033 750 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CCT2P78371 535 aaKnown RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 NNTQ13423 1086 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CALCRLQ16602 461 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 FAM43BQ6ZT52 329 aaPredicted RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 NECAB2Q7Z6G3 386 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 RSPH3Q86UC2 560 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 CCDC144CPQ8IYA2 1237 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MAP3K14Q99558 947 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 DNAJC25Q9H1X3 360 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 PCDHB15Q9Y5E8 787 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 SNX14Q9Y5W7 946 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 TACC3Q9Y6A5 838 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 RAG1P15918 1043 aa6.69□□□□□ -1.34
CCDC144A-212ENST00000470068 MAPK8IP2Q13387 824 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms