RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 BICDL2A1A5D9 508 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 NPR1P16066 1061 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 BMS1Q14692 1282 aaKnown RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 CNNM4Q6P4Q7 775 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 GPR161Q8N6U8 529 aaKnown RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 GOLGA1Q92805 767 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 HAS1Q92839 578 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 ARGLU1Q9NWB6 273 aaPredicted RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 CTAGE9A4FU28 777 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 ERCC3P19447 782 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 CRKP46108 304 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 TMEM266Q2M3C6 531 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 KIAA0825Q8IV33 1275 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 NOC4LQ9BVI4 516 aaKnown RBP16.4■□□□□ 0.22
CBWD3-205ENST00000469687 GUCA1BQ9UMX6 200 aa16.4■□□□□ 0.22
CBWD3-205ENST00000469687 G3V3G9 751 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 SASH3O75995 380 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
CBWD3-205ENST00000469687 PLA2G4AP47712 749 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 CHMP4BP1P59074 171 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 HERVK_113P62684 666 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 DCAF8Q5TAQ9 597 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 SRGAP1Q7Z6B7 1085 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
CBWD3-205ENST00000469687 DDX25Q9UHL0 483 aaKnown RBP16.39■□□□□ 0.21
CBWD3-205ENST00000469687 DDTLA6NHG4 134 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 ZBTB5O15062 677 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 HLA-DOAP06340 250 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 IDEP14735 1019 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 CC2D1AQ6P1N0 951 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-205ENST00000469687 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 UNC13DQ70J99 1090 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 RAD54LQ92698 747 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 CUL5Q93034 780 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 MYO3BQ8WXR4 1341 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 MMP10P09238 476 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 LRRC41Q15345 812 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 DDX12PQ92771 950 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-205ENST00000469687 NAPGQ99747 312 aaPredicted RBP16.38■□□□□ 0.21
CBWD3-205ENST00000469687 PSTPIP2Q9H939 334 aa16.38■□□□□ 0.21
CBWD3-205ENST00000469687 PDIA5Q14554 519 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 TMEM119Q4V9L6 283 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 RCCD1A6NED2 376 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 EPHB6O15197 1021 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 EEF2P13639 858 aaKnown RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 MEA1Q16626 185 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 COBLL1Q53SF7 1204 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 SH3BP5LQ7L8J4 393 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
CBWD3-205ENST00000469687 ANKZF1Q9H8Y5 726 aa16.37■□□□□ 0.21
CBWD3-205ENST00000469687 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ENC1O14682 589 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 SNAP25P60880 206 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 QRICH1Q2TAL8 776 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 RAB34Q9BZG1 259 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 SMCHD1A6NHR9 2005 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 TAL1P17542 331 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 MRPL12P52815 198 aaKnown RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 AMPD2Q01433 879 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 GABPB1Q06547 395 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 EHHADHQ08426 723 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 NCAPH2Q6IBW4 605 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms