RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PRR36Q9H6K5 1346 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 RTP1P59025 263 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 CAP1Q01518 475 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 LAPTM5Q13571 262 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 GALNT18Q6P9A2 607 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 LDHDQ86WU2 507 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 IGDCC3Q8IVU1 814 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 LINC00116Q8NCU8 138 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 HDAC8Q9BY41 377 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 FOXP3Q9BZS1 431 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
VPS8-219ENST00000469479 SBNO1A3KN83 1393 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 NUP155O75694 1391 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 ROCK1Q13464 1354 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 TMEM82A0PJX8 343 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 BRD1O95696 1058 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 P4HBP07237 508 aaKnown RBP7.09□□□□□ -1.27
VPS8-219ENST00000469479 SDHBP21912 280 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 EZH2Q15910 746 aaKnown RBP7.09□□□□□ -1.27
VPS8-219ENST00000469479 KRT28Q7Z3Y7 464 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 TCTN2Q96GX1 697 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 KLHL14Q9P2G3 628 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 TNFRSF10DQ9UBN6 386 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
VPS8-219ENST00000469479 NAIPQ13075 1403 aa7.09□□□□□ -1.28
VPS8-219ENST00000469479 RRBP1Q9P2E9 1410 aaKnown RBP7.09□□□□□ -1.28
VPS8-219ENST00000469479 TNS1Q9HBL0 1735 aaKnown RBP7.08□□□□□ -1.28
VPS8-219ENST00000469479 WTIPA6NIX2 430 aaPredicted RBP7.08□□□□□ -1.28
VPS8-219ENST00000469479 RNF4P78317 190 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 XPCQ01831 940 aaPredicted RBP7.08□□□□□ -1.28
VPS8-219ENST00000469479 ZFYVE27Q5T4F4 411 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 NLGN1Q8N2Q7 840 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 CRELD1Q96HD1 420 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 GPR20Q99678 358 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
VPS8-219ENST00000469479 REV1Q9UBZ9 1251 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 TLR6Q9Y2C9 796 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 TECPR2O15040 1411 aa7.08□□□□□ -1.28
VPS8-219ENST00000469479 SPATA31A5Q5VU36 1347 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 SPATA31A7Q8IWB4 1347 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 AKAP8O43823 692 aaKnown RBP7.07□□□□□ -1.28
VPS8-219ENST00000469479 GBP1P32455 592 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 KCNC1P48547 511 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 TMC6Q7Z403 805 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
VPS8-219ENST00000469479 PHC3Q8NDX5 983 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 PLCD4Q9BRC7 762 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 PALD1Q9ULE6 856 aa7.07□□□□□ -1.28
VPS8-219ENST00000469479 FAM221AA4D161 298 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 OVOL3O00110 214 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 PRPF40AO75400 957 aaKnown RBP7.06□□□□□ -1.28
VPS8-219ENST00000469479 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
VPS8-219ENST00000469479 FAM50AQ14320 339 aaKnown RBP7.06□□□□□ -1.28
VPS8-219ENST00000469479 RTP5Q14D33 572 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 RAB3GAP1Q15042 981 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 GATAD2BQ8WXI9 593 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 FCRL2Q96LA5 508 aaPredicted RBP7.06□□□□□ -1.28
VPS8-219ENST00000469479 BTG4Q9NY30 223 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 TAF6LQ9Y6J9 622 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 THSD7AQ9UPZ6 1657 aa7.06□□□□□ -1.28
VPS8-219ENST00000469479 FAM83GA6ND36 823 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 BUB1BO60566 1050 aaPredicted RBP7.05□□□□□ -1.28
VPS8-219ENST00000469479 HTR3BO95264 441 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 SYPP08247 313 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 CBX2Q14781 532 aaPredicted RBP7.05□□□□□ -1.28
VPS8-219ENST00000469479 HHIPL2Q6UWX4 724 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 BNC2Q6ZN30 1099 aaPredicted RBP7.05□□□□□ -1.28
VPS8-219ENST00000469479 KIF2CQ99661 725 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 GTF3C3Q9Y5Q9 886 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 RREB1Q92766 1687 aa7.05□□□□□ -1.28
VPS8-219ENST00000469479 COL14A1Q05707 1796 aaKnown RBP7.05□□□□□ -1.28
VPS8-219ENST00000469479 FADS2P1A8MWK0 482 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 K7ESM1 405 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 RGS13O14921 159 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 SLURP1P55000 103 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 LMNB2Q03252 620 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 BBS9Q3SYG4 887 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 ABCC11Q96J66 1382 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 NRAPQ86VF7 1730 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 NRXN1Q9ULB1 1477 aa7.04□□□□□ -1.28
VPS8-219ENST00000469479 PRICKLE3O43900 615 aaPredicted RBP7.03□□□□□ -1.28
VPS8-219ENST00000469479 FKTNO75072 461 aa7.03□□□□□ -1.28
VPS8-219ENST00000469479 PFKLP17858 780 aa7.03□□□□□ -1.28
VPS8-219ENST00000469479 ST13P50502 369 aaKnown RBP7.03□□□□□ -1.28
VPS8-219ENST00000469479 TAF1CQ15572 869 aaPredicted RBP7.03□□□□□ -1.28
VPS8-219ENST00000469479 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
VPS8-219ENST00000469479 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
VPS8-219ENST00000469479 UBXN11Q5T124 520 aa7.03□□□□□ -1.28
VPS8-219ENST00000469479 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS8-219ENST00000469479 SPATA31A1Q5TZJ5 1347 aa7.02□□□□□ -1.28
VPS8-219ENST00000469479 NUP188Q5SRE5 1749 aa7.02□□□□□ -1.29
VPS8-219ENST00000469479 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
VPS8-219ENST00000469479 FMN2Q9NZ56 1722 aa7.02□□□□□ -1.29
VPS8-219ENST00000469479 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms