RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 CWF19L2Q2TBE0 894 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 RRAGBQ5VZM2 374 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 RNF10Q8N5U6 811 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 CFAP61Q8NHU2 1237 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 NELFBQ8WX92 580 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 DBNDD2Q9BQY9 259 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 IFIH1Q9BYX4 1025 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 KRT23Q9C075 422 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 CSRNP2Q9H175 543 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 VCXQ9H320 206 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 CCDC134Q9H6E4 229 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 LRWD1Q9UFC0 647 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 TFR2Q9UP52 801 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 LRRC42Q9Y546 428 aa9.94□□□□□ -0.82
SMARCE1-207ENST00000469334 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 BCL9O00512 1426 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 CHD4Q14839 1912 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 A0A0G2JLW4 131 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 PHF20L1A8MW92 1017 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 CREB3O43889 395 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 KIF4AO95239 1232 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 TMOD1P28289 359 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 GBP1P32455 592 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 CTNNA1P35221 906 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 ALDH5A1P51649 535 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 NCALDP61601 193 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 TFCP2Q12800 502 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 ZNF658Q5TYW1 1059 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 NUGGCQ68CJ6 796 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 FERMT2Q96AC1 680 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 ZNF317Q96PQ6 595 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 GPR108Q9NPR9 543 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
SMARCE1-207ENST00000469334 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 CES2O00748 559 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 FMNL1O95466 1100 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 CHGBP05060 677 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 GSTA2P09210 222 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 AFMP43652 599 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 PSMC4P43686 418 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 NTRK3Q16288 839 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ERICH1Q86X53 443 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 TLCD1Q96CP7 247 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 INCENPQ9NQS7 918 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 EXOC1Q9NV70 894 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 CNOT8Q9UFF9 292 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 PCDHA13Q9Y5I0 950 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 PRR36Q9H6K5 1346 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 HIP1RO75146 1068 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 MOCS3O95396 460 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 PENKP01210 267 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ACADSP16219 412 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 TRIM21P19474 475 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ABCD1P33897 745 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 RFX5P48382 616 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SH3BGRP55822 239 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 MAP3K12Q12852 859 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 ANO7Q6IWH7 933 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 APOA5Q6Q788 366 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 HOOK3Q86VS8 718 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SMYD4Q8IYR2 804 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 CNBD1Q8NA66 436 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 TMEM87BQ96K49 555 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 TLR10Q9BXR5 811 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 MAGEC2Q9UBF1 373 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 BLOC1S6Q9UL45 172 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 DUSP10Q9Y6W6 482 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 LMTK3Q96Q04 1460 aa9.92□□□□□ -0.82
SMARCE1-207ENST00000469334 SIPA1L3O60292 1781 aaPredicted RBP9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 ZBTB43O43298 467 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 FAM163BP0C2L3 166 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 RARAP10276 462 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 SKIV2L2P42285 1042 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 UAP1Q16222 522 aaPredicted RBP9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 GALNTL6Q49A17 601 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 RAB3IPQ96QF0 476 aaPredicted RBP9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 FAM167BQ9BTA0 163 aa9.91□□□□□ -0.82
SMARCE1-207ENST00000469334 ZWILCHQ9H900 591 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms